Gene Bcav_0897 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_0897 
Symbol 
ID7860262 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp997238 
End bp998581 
Gene Length1344 bp 
Protein Length447 aa 
Translation table11 
GC content75% 
IMG OID643864979 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_002880920 
Protein GI229819394 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2271] Sugar phosphate permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0894914 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.147269 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACGT CCGCCGTCCG CAGCAGCCGC ACCGAACGCC TCGACGACCT GCCGGTCTCC 
CGCGAGCACG TCCGGCTGGT GTGGGGCTCG GGGATCGGGT GGGCGCTGGA CGCGTTCGAC
GTCGGGCTCA TCTCGTTCGT GCTCGCGCAG CTCGCCGTGA CGTGGCAGGC GAGCCCGGGC
GAGCTGTCGT GGATCGCCTC GCTGGGCTTC GTCGGGATGG CCGTCGGCGC CGCGCTCGGA
GGTCTGCTCG CGGACCGCGT CGGCCGGCGC ACGGTCTTCG CCCTGACGCT GCTGGTCTAC
GGGGTCGCGA CCGGCGTCTC CGCCCTGGCC TGGTCCGTCG CGGCTCTCGC GGCACTGCGC
GTCGTCGTCG GTCTCGGGCT CGGTGCCGAG CTGCCCGTGG CGTCGACGCT CGTCAGCGAG
TTCGCCCCGC GGCGCGTGCG CGGCCGCGCC GTCGTGTGGC TCGAGTCGTT CTGGGCGCTC
GGCTGGCTGC TCGCCGCCGT GGTCGGCTTC CTCGTCGTCC CCCGCGGCGA CGACGGGTGG
CGCTGGGCGC TCGCGATCGG CGCCGTCCCG GCCGTCTACG CGATCGTCGT CCGCCTCGGC
CTGCCCGAGT CCGTGCGCTT CCTCGAGCTG CGCGGACGCC ATCGGGAGGC CGAGCTGACG
GTCCGCCGGT TCGAGCGCGC GTCAGGCGTC GAGACGGTCG GGCCGCTGCC GGCCGATGAA
CCGCCCGGGG CGCGGGAGCG CGGCAGCGCG TGGCAGGGCG TCCGGTCGCT GTGGCGTCCC
CGGCTGCGCC GCGCCACCGG CGGGCTCTGG ACGGTGTGGT TCTTCGTCAA CCTGTCGTAC
TACGGCGCGT TCATCTGGAT CCCGACCCTG CTCGTCGCCG CCGGACACAC GCTCACGAAG
TCGTTCGAGT ACACGCTGAT CATCACGCTG GCCCAGCTGC CCGGGTACGC CGTCGCGGCC
TGGCTGATCG AGCGGTGGGG ACGACGTCGG ACCCTGGCGG TCTTCCTCGT GGGCTCGGCG
CTCGCGGCCG TCGGCTTCGG GACGGCCGGC TCGACGACGG CGATCCTCGT GTTCGGTTCG
CTCCTGTCGT TCTTCAACCT CGGCGCGTGG GGTGCGCTGT ACGCCGTGAC ACCCGAGGTG
TACCCGACGG CGCTGCGCGG CACGGGTGCC GGCTGGGCGG CCGGCGCCGG ACGCGTCGCG
TCGATCCTCG CGCCGTTCCT CGTGGCGTGG CTGCAGCCCC GGGGCGTCGG GCTGCTCTTC
GCCGTGTTCG CGGCCGCGTT CGCCGTCGCC GCGGCGGCCA CCACCGCCCT GCCCGAACGC
GCCGGGGCGG CTCTCGAGAG CTGA
 
Protein sequence
MSTSAVRSSR TERLDDLPVS REHVRLVWGS GIGWALDAFD VGLISFVLAQ LAVTWQASPG 
ELSWIASLGF VGMAVGAALG GLLADRVGRR TVFALTLLVY GVATGVSALA WSVAALAALR
VVVGLGLGAE LPVASTLVSE FAPRRVRGRA VVWLESFWAL GWLLAAVVGF LVVPRGDDGW
RWALAIGAVP AVYAIVVRLG LPESVRFLEL RGRHREAELT VRRFERASGV ETVGPLPADE
PPGARERGSA WQGVRSLWRP RLRRATGGLW TVWFFVNLSY YGAFIWIPTL LVAAGHTLTK
SFEYTLIITL AQLPGYAVAA WLIERWGRRR TLAVFLVGSA LAAVGFGTAG STTAILVFGS
LLSFFNLGAW GALYAVTPEV YPTALRGTGA GWAAGAGRVA SILAPFLVAW LQPRGVGLLF
AVFAAAFAVA AAATTALPER AGAALES