Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcav_0877 |
Symbol | |
ID | 7860241 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beutenbergia cavernae DSM 12333 |
Kingdom | Bacteria |
Replicon accession | NC_012669 |
Strand | + |
Start bp | 977091 |
End bp | 978191 |
Gene Length | 1101 bp |
Protein Length | 366 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 643864958 |
Product | rhs protein |
Protein accession | YP_002880900 |
Protein GI | 229819374 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000054215 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.085728 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGGGA ACTCGCTCGT CGTCAGCCCC ACCGAGTCGT CCCCGCTCGC CGGCACCCTG CTCGTCGAGA GCGTCTCCGA CCTGTCGACG TCGCTCGCCA ACGGCGACTG GCTCGCCGCC GGGATGGCGG GTGCGTCGAC CGCCCTGGAC ACCGTCGCGA CGGCGATGGA CCCGCTCGGC TCGCTGCTGG GCGCCGGGCT CGGGTGGCTG ATGGAGCACC TCGAGCCGCT GAAGGGCTGG CTCAACGACC TCACCGGCGA CCCCGGCGCC GTCGGCGGCT TCGCCGGGAC GTGGGAGAAC ATCGCCACGC GGATGTCCGA GAGCGCGGAG TCGCTGCGCA CCGCCGTCTC GAGCGACCTC GAGTCGCTCG AGGGTGCGGC CGTCACGTCG TACGCGAGCT TCTCCGACGA CGTCGCGGCG ATGCTGGCGG CGCTCGGCGG CTCGTCCGGC GCCGTCGCCG GCGCGCTGCG CACGTGCGCC ACGATCGTGC AGGTCGTCCA CGACCTCGTG CGGGACGCGC TCGCGCAGCT CGTCGGCTCG GCGATCTCCT GGGCGGCCCA GATCACGTTC ACCCTCGGGC TCGGCACCCC GTGGGTGATC AGCCAGGTCA GCACGCGTGT GTCGTCGCTC GCGGCTCGGG TCGGCAGCAA GGTGACGGCG CTCGTCACCT CGGTGCGCAA CCTGCGCGGC GTCATCGACT CGCTCGTCGC GCTGCTGCGC CGCACCCGCG GCACGCTCGA CGACGTCACG GCCCGTCCGG ACGCCGTCGC CCCGACCCCG CGCACCGACC TGCCGTACTC GAACCCGCGG CGTCGGCCGT CCTACCGCCA GGGTGTCCCC GAGGAGGTCT GGGACAACGC CCGCGGCCCG GACGGCGTGG TCCGCGACCC CAACACCGGC GACGTCATCG ACTGGACCCC CGGCACGCCC CGCCGGGACG TGTGGGACAT GGGGCACGTG CCCGGCGAGC GGTACCACGA CGTCTGGGAG CGGTACATGC GCGGCGAGAT GACCCCGGCG GAGTTCCGCG ACTGGTTCAA CGACCCCGCG AACTACCGGC CGGAGCTCCC GGGCAACAAC CGGGGCCATC GCTACGAGTA G
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Protein sequence | MTGNSLVVSP TESSPLAGTL LVESVSDLST SLANGDWLAA GMAGASTALD TVATAMDPLG SLLGAGLGWL MEHLEPLKGW LNDLTGDPGA VGGFAGTWEN IATRMSESAE SLRTAVSSDL ESLEGAAVTS YASFSDDVAA MLAALGGSSG AVAGALRTCA TIVQVVHDLV RDALAQLVGS AISWAAQITF TLGLGTPWVI SQVSTRVSSL AARVGSKVTA LVTSVRNLRG VIDSLVALLR RTRGTLDDVT ARPDAVAPTP RTDLPYSNPR RRPSYRQGVP EEVWDNARGP DGVVRDPNTG DVIDWTPGTP RRDVWDMGHV PGERYHDVWE RYMRGEMTPA EFRDWFNDPA NYRPELPGNN RGHRYE
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