| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_0874 |
|---|
| Symbol | |
|---|
| ID | 7860238 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | + |
|---|
| Start bp | 974903 |
|---|
| End bp | 975379 |
|---|
| Gene Length | 477 bp |
|---|
| Protein Length | 158 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | 643864955 |
|---|
| Product | transcriptional regulator, MarR family |
|---|
| Protein accession | YP_002880897 |
|---|
| Protein GI | 229819371 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1846] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.211566 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.0694607 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACACGCA CCTCCACCGC GCCGGCCCGT CCGGACACCC CTGACGCGCC CAAGCGCCCC
GCGACGCAGG CCGACCTGGC CTCGCAGCTG CGGATGGGGA TCCTTCGCGT CTCGCGGCGG
CTGCGGGCCG AGCGGAGCGG GCGGCTCACC GAGGCGCAGT ACTGCGTGCT CGCCGACCTC
AAGACGCAGG GTCCGATGAC CCCGTCCGAG CTGGCCGAAC GCGAGCAGGT CCAGCCGCCG
TCGATGACCC GTACCGTCGC CGGGCTCGCC GACGCGGGTC TGGTCTCGCG GAGCGAGCAC
CCGGAGGACC GCCGCCAGGT GCTCGTCTCG CTGTCCGACG CCGGCCGCGA GGTCGTCGTC
GCGACCCGCC GCCGCCGCGA TGCGTGGCTC GCCCGCCGCA TCGCCGCCCT GTCCGCCGAC
GAGCGCCGCA CGCTCGCCGA CGCCGCCGTC ATCCTGAGGA GGATCGCCGC CGAGTGA
|
|---|
| Protein sequence | MTRTSTAPAR PDTPDAPKRP ATQADLASQL RMGILRVSRR LRAERSGRLT EAQYCVLADL
KTQGPMTPSE LAEREQVQPP SMTRTVAGLA DAGLVSRSEH PEDRRQVLVS LSDAGREVVV
ATRRRRDAWL ARRIAALSAD ERRTLADAAV ILRRIAAE
|
|---|
| |