| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_0864 |
|---|
| Symbol | |
|---|
| ID | 7860228 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | + |
|---|
| Start bp | 961922 |
|---|
| End bp | 963475 |
|---|
| Gene Length | 1554 bp |
|---|
| Protein Length | 517 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 643864945 |
|---|
| Product | Xanthine/uracil/vitamin C permease |
|---|
| Protein accession | YP_002880887 |
|---|
| Protein GI | 229819361 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2252] Permeases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.214606 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.081922 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTACGAG CACTCGTGGC GCTCTCGCGT CAGGCTCTGC CACTCTTGGG CCTCGTGACC
ACGACTCGAG CGCCGGAGCA GACCGGCGTA CGCGGTGCCC TCGACCGGTA CTTCCTCGTC
TCGGAGAGGG GGTCGACGTT CGGCCGCGAG ATCCGCGGCG GGCTGGTGAC GTTCTTCGCG
ATGGCCTACA TCATCGTGCT GAACCCGTTG ATCCTCGGCA CCGTGCCGGA CGACGGCTTC
ACCGGCAGCT TCATCGGCGG TGACCCGGAG CTCGCCATCG CGCGCGTGGC GGCGACGACG
GCGCTCATCG CCGGCCTCAT GTCGATCCTC ATGGGGGTCG TGGCGAAGTT CCCGCTGGCG
CTCGCAGCGG GGATGGGGCT CAACGTCGTC GTGACGTTCT CGATCGCGAC GCTGCCCGGG
ATGACGTGGG CCGACGCGAT GGGGATCGTG GTGCTCGAGG GCATCATCAT CCTGGTCCTC
GTGCTGACCG GGTTCCGGGA GGCCGTGTTC CGGGCGGTGC CCCGGGAGCT CAAGACGGCG
ATCGGCGTCG GCATCGGTCT GTTCATCGCG TTCGTCGGGC TCGTGAACGC CGGGATCGTG
CGGACGCCGC TCTCGCTCGG CACGCCCGTC GACCTCGGGG TCGGTGGCTC GTTCGCCGGC
TGGCCGATGC TCGTGTTCGT GGTCGGCCTC GTGGTCTCGA TCGTGCTGTA CGTCCGCAAG
GTGCGCGGTG CGCTGCTCAT CGCGATCGGC GCGGCGACGG TGCTGGCGCT CGTCATCCAG
GCGTTCGCCG GGCTCGGGCT GCGGTCCGTG ACCACGACCG CCGACGGCCT CGTCGCCGAG
AACGACACCG GCTGGATGCT CAACGTCCCG GAGCTGTCCG GGTCGCCGGT GCAGACGCCG
GACTTCGGGC TGCTCGGCCA GTTCTCCCTG TTCGGGTCGA TCGAGAAGAT CGGGCTGCTC
ACCGTCGTGC TGCTGGTCTT CTCGCTCCTG CTGGCGGACT TCTTCGACAC GATGGGGACG
ATGGTCGCCG TCGGCGGCGA GGCGAAGCTG CTGGACGCCG ACGGCAACCC GCCGAAGACC
CGCCAGATCC TCGTCGTGGA CTCGATCGCC GCCGTGGCGG GCGGCGCGGG GAGCGTCTCG
TCGAACACGA GCTATGTGGA GTCCGCGGCG GGTGTGGGTG AGGGCGCGCG CACCGGCCTC
GCCTCGGTGG TGACGGGTGT GGCGTTCCTG CTGGCGACGT TCCTGGCGCC GCTCGTGGAG
CTCGTGCCGT CGGAGGCGGC GACGCCGGCC CTCGTGCTGG TCGGGTTCCT CATGATGTCG
CAGGTGGCCG GCATCTCCTG GACGCGCCTC GAGGTGGCGA TCCCGGCGTT CCTCACGATC
GCCGTCATGC CGTTCACGTA CTCGATCACC GCCGGGATCG GGGCGGGCTT CATCGCGTAC
GTCCTGGTCC GGGTGACGCA GGGCAAGGTG CGCGAGATCC ACCCGCTCAT GTGGGTGGCC
GCTGCGGCGT TCGTCCTGTA CTTCGTGCGG GGGCCGCTCA CCGCGCTGCT CTAG
|
|---|
| Protein sequence | MLRALVALSR QALPLLGLVT TTRAPEQTGV RGALDRYFLV SERGSTFGRE IRGGLVTFFA
MAYIIVLNPL ILGTVPDDGF TGSFIGGDPE LAIARVAATT ALIAGLMSIL MGVVAKFPLA
LAAGMGLNVV VTFSIATLPG MTWADAMGIV VLEGIIILVL VLTGFREAVF RAVPRELKTA
IGVGIGLFIA FVGLVNAGIV RTPLSLGTPV DLGVGGSFAG WPMLVFVVGL VVSIVLYVRK
VRGALLIAIG AATVLALVIQ AFAGLGLRSV TTTADGLVAE NDTGWMLNVP ELSGSPVQTP
DFGLLGQFSL FGSIEKIGLL TVVLLVFSLL LADFFDTMGT MVAVGGEAKL LDADGNPPKT
RQILVVDSIA AVAGGAGSVS SNTSYVESAA GVGEGARTGL ASVVTGVAFL LATFLAPLVE
LVPSEAATPA LVLVGFLMMS QVAGISWTRL EVAIPAFLTI AVMPFTYSIT AGIGAGFIAY
VLVRVTQGKV REIHPLMWVA AAAFVLYFVR GPLTALL
|
|---|
| |