Gene Bcav_0858 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_0858 
Symbol 
ID7860222 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp957281 
End bp957790 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content72% 
IMG OID643864939 
ProductPyruvoyl-dependent arginine decarboxylase 
Protein accessionYP_002880881 
Protein GI229819355 
COG category[S] Function unknown 
COG ID[COG1945] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00286] arginine decarboxylase, pyruvoyl-dependent 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.979004 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0996152 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCACAG CAAGGCCCGA AACCGGCCCG ACGATCCGGA TCAGCACCGG CACAGGCTCT 
GGACGCACCA CGCTGTCCGC GTTCGACGCG GCCCTGCGCA GCGCCGGAGT CGCGGACTTC
AACCTGCTGC GGCTGAGCTC GATCATCCCG CCCGGCAGCA CCGTGCTCGA GGTCGGCGCC
GCCGACCAGC TCAGCGGTGC GCACGGCGAC CGGCTCTACT GCGTCTACGC CGAGGCGCAC
GCCGAGCTCC CGCACCACGA GGCGTGGGCG GGCATCGCGT GGGCGATCGC GCTCGACGGG
AGCGGAGGCG GCCTCTTCGT CGAGCACGAA GGACCGTCGC GAGAGCAGGT CGACCGGGAC
CTCACCGCGA CGCTCGAGGA TCTCGTCGAC CGCCGCGGTG GGGGCTACGA GATCGCCGGC
CGCGCGATCA CGTCCGCCAT GTGCGAGACC GAGCCGGTGT GCGCCGTCGT CATCGCGTCC
TACGCAGCGC GGGGATGGTC CGTCGAGTGA
 
Protein sequence
MTTARPETGP TIRISTGTGS GRTTLSAFDA ALRSAGVADF NLLRLSSIIP PGSTVLEVGA 
ADQLSGAHGD RLYCVYAEAH AELPHHEAWA GIAWAIALDG SGGGLFVEHE GPSREQVDRD
LTATLEDLVD RRGGGYEIAG RAITSAMCET EPVCAVVIAS YAARGWSVE