Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcav_0845 |
Symbol | |
ID | 7860209 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beutenbergia cavernae DSM 12333 |
Kingdom | Bacteria |
Replicon accession | NC_012669 |
Strand | + |
Start bp | 941549 |
End bp | 943018 |
Gene Length | 1470 bp |
Protein Length | 489 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 643864926 |
Product | drug resistance transporter, EmrB/QacA subfamily |
Protein accession | YP_002880868 |
Protein GI | 229819342 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.222515 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.167552 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGCGA CCCTGCCCAA CCCCGTCCCG ACGGCTGAGC CCGAGCGCCT CAGCCGGGAC AAGTTCGTCC TCATCGCCCT GCTTCTCGGC TCCGCCTTCG TCGTCATCCT CAACGAGACC ACCATGAGCG TCGCGCTCGC GCCGCTCATG AAGGACCTCG GCATCACCGC CACCACGGGT CAGTGGCTCA CCACGGCGTT CATGCTCACC ATGGCCGTCG TCATCCCTGC CACCGGCTAC CTGCTGCAGC GGCTCGGTAC CCGCGGGGCG TACCTGCTCG CGATGTCCCT GTTCAGCGCG GGCACCCTGC TCGCCGCCGT CTCGCCCACG TTCCCGATCC TGCTCGGCGC CCGGGTCGTC CAGGCCTCCG GGACCGCGAT CATGATGCCG CTGCTCATGA CGACGATCAT GACGATCGTG CCGACGTCGT CCCGCGGCAA GATCATGGGG AACGTCGCGA TCGTCATGGC CGCCGCGCCC GCGCTCGGGC CCGCCATCTC CGGCGTCATC CTCAACTCGC TCGGGTGGCG GTGGGTCTTC GGCATCGTGC TGCCGATCGC CCTGGTGTCG CTGGTGGCCG GGTTCCTGCA CGTGCGCGAC ACGGGTGAGC GGACGCGCGC GCCGCTGGAC CCGCTGTCGC TGGTGCTCGC CGTGGTGGCG TTCGGTGGGC TCGTGTACGG ACTGTCGAGT CTCGGCGAGG CCGCCCGGCA CGCGCCGCCG GTGCCGCCGT GGATCCCGCT GACGGCGGGC TCGGTGATGC TCGTGGCGTT CGTCGCTCGT CAGCTCCTGC TCCAGCGGAC CGACCGCGCG CTCCTCGACC TCCGCGTGTT CAGCTCGCGG TCGTTCGCCG TCTCCCTCGG GATCATGGCC GTGTCGATGA TCGCGTTGTT CGGGTCGCTG ATCCTGCTCC CGCTCTACCT GCAGGACTCG CTCAACCTCA CGTCCCTCAC CACCGGCCTG ATCGTGCTGC CGGGCGGCCT CGCCATGGGC CTCCTCGGTC CGACCGTGGG GCGGCTGTTC GACCGGGTCG GCCCCCGACC GCTGGTCATC CCGGGCGCCG CGGTGGTGCT CGGCGCGCTG GGTCTCCTCA CGACCGTGAG CGCCGGCACG TCGCCGTGGT TCGTGCTCGG CGCGCACGTG CTGCTGAGCC TCGGCCTGGC GTTCGTGTTC ACGCCGCTGT TCACGACGGC GCTCGGGGCC CTCGAGCCGC ACCTGTACTC GCACGGCTCC GCCGTCATCG GCACGACGCA GCAGCTCGCC GGGGCCGCGG GCACGGCCAT GTTCGTCGCG GTCATGACAC AGGGTTCCGT GGCGGCGGGG GAGGCCGGGG CGTCGCCCGC GGCGGCGCTG GCCGACGGCG TCGGGACGGC GTTCGTGTGG GGCGCGGCCT TCATGGCGCT CGCGTTCGCC CTGACGTTCC TGCTCCGCCG GCAGCCCGCC GCGGAGCTGG AGCACGCCGT CGCGCACTGA
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Protein sequence | MSATLPNPVP TAEPERLSRD KFVLIALLLG SAFVVILNET TMSVALAPLM KDLGITATTG QWLTTAFMLT MAVVIPATGY LLQRLGTRGA YLLAMSLFSA GTLLAAVSPT FPILLGARVV QASGTAIMMP LLMTTIMTIV PTSSRGKIMG NVAIVMAAAP ALGPAISGVI LNSLGWRWVF GIVLPIALVS LVAGFLHVRD TGERTRAPLD PLSLVLAVVA FGGLVYGLSS LGEAARHAPP VPPWIPLTAG SVMLVAFVAR QLLLQRTDRA LLDLRVFSSR SFAVSLGIMA VSMIALFGSL ILLPLYLQDS LNLTSLTTGL IVLPGGLAMG LLGPTVGRLF DRVGPRPLVI PGAAVVLGAL GLLTTVSAGT SPWFVLGAHV LLSLGLAFVF TPLFTTALGA LEPHLYSHGS AVIGTTQQLA GAAGTAMFVA VMTQGSVAAG EAGASPAAAL ADGVGTAFVW GAAFMALAFA LTFLLRRQPA AELEHAVAH
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