| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_0791 |
|---|
| Symbol | |
|---|
| ID | 7859122 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | - |
|---|
| Start bp | 881971 |
|---|
| End bp | 882897 |
|---|
| Gene Length | 927 bp |
|---|
| Protein Length | 308 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 643864871 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_002880814 |
|---|
| Protein GI | 229819288 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0395] ABC-type sugar transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.013285 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCTTCA TGACCCGGGC GCTCCCCGCC CGCATCCGCA CGCGGACTCC ACGTGGCGCG
ACCTCCGAGT CGGAGGACAC GTACTTCGAG AAGCTCGGCA GCACGAGCCG CACGAGGTTC
CTACGGCACG TCCTGCTCTG CGCCGTCGGC GCCGTCATGC TCTACCCGCT GCTGTGGATG
CTCTCGAGCT CGTTCAAGCC GTCCGACCTG GTGTTCTCCG ACCTGTCGCT CTGGCCCGCC
GAGTGGGACC TGTCCAACTA CACGACCGGG TGGAACGCTC TGGCGCACCC GTTCACCGTC
TACATCCTGA ACTCGCTCGT CATCGTCGTC CTGACGATCA TCGGCAACCT CGCGTCGTGC
GGGCTGGCCG CGTACGCCTT CGCCCGGATG GAGTTCCGCG GCCGCAAGGT CCTCTTCGCG
CTCATGCTCG GCACGCTCAT GCTGCCCGGG CACGTGCTGC TCATCCCGCA GTACGTGGTG
TTCAACGTGC TCGGCTGGAT GAACACGTAC CTGCCGCTCG TGGTGCCGAA CTTCCTCGCG
ACGAACGCGT TCTTCATCTT CCTCATGGTG CAGTTCATGC GGAACCTGCC GAGCGAGCTC
GACGACGCCG CCCGGATCGA CGGGTGCGGA CCGTTCGGCA CGTTCCGGCG CGTCATCGTG
CCGCTGTGCA TGCCGGCGTT CGCGACGACG GCGATCTTCA CGTTCATCTC GACGTGGAAC
GAGTTCTTCG GTCCCCTGCT GTACCTGACC GACGACGCGC TGTACACCGT CCCCCTCGCC
CTGCGGCAGT TCATGGACTC CGAGGGTCAG TCGGCCTGGG GGCCCATGTT CGCGATGTCC
GTCGTCTCGC TCGCCCCCGT CATCGGGTTC TTCATCGCCG GGCAGAAGTA CCTCATCAAG
GGGATCGCCA CGACCGGACT CAAGTGA
|
|---|
| Protein sequence | MAFMTRALPA RIRTRTPRGA TSESEDTYFE KLGSTSRTRF LRHVLLCAVG AVMLYPLLWM
LSSSFKPSDL VFSDLSLWPA EWDLSNYTTG WNALAHPFTV YILNSLVIVV LTIIGNLASC
GLAAYAFARM EFRGRKVLFA LMLGTLMLPG HVLLIPQYVV FNVLGWMNTY LPLVVPNFLA
TNAFFIFLMV QFMRNLPSEL DDAARIDGCG PFGTFRRVIV PLCMPAFATT AIFTFISTWN
EFFGPLLYLT DDALYTVPLA LRQFMDSEGQ SAWGPMFAMS VVSLAPVIGF FIAGQKYLIK
GIATTGLK
|
|---|
| |