Gene Bcav_0675 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_0675 
Symbol 
ID7858477 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp749465 
End bp750136 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content76% 
IMG OID643864756 
ProductNAD-dependent epimerase/dehydratase 
Protein accessionYP_002880699 
Protein GI229819173 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0451] Nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.523369 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACAGA TCGCGATCGT CGGTGGTCAC GGCAAGATCG CCCGGCTCCT CATCCCGCTG 
CTCGTCGCGC GCGGGGACAC GCCCGTCGCG CTCATCCGCA ACCCGGAGCA CGCGCCGGAC
GTGCGGGACG CGGGCGGCGT CCCGCGCCTG CTCGACATCG AGGCTCAGGA CGCGGCCGCG
TTCGCCGGCG CGTTCGGCCG CGCCGACGCC GTCGTCTTCG CGGCCGGGGC CGGTCCCGAC
GGGCGGGTCG ACCGGAAGAC GAGCGTGGAC CTGCAGGGAG CGTTGAAGTC GATCGAGGGC
GCCCGTTCCG CGGGTGTGCG CCGGTTCGTG CAGGTGTCGG CGATCGGCGT CGACGAGCCG
GTGGGCGACG ACGCGACCGA GGTGTGGGCC GCGTACGTCG CCGCGAAGCG GGACGCCGAC
GCCGCGCTCC GTGACTCCGG CCTGGAGTGG ACGATCATCC GCCCGGCCCG ACTCACGGAC
TCGCCGGGCA CGGGGCTCGT CAGCCTCGCG CGGTCCCTCC CCGGGGGCGA GGTGCCGCGG
GCCGACGTCG CGGCGGTGCT CGCCACCGTG CTCGGCAGTC CGTCGAGCGT CGGTCACCAG
TGGGACCTCG TGGGCGGCAC GACGCCGGTG CTCGAGGCCG TCGCGACCGC CATCGAGGCC
GAGCGCGGCT GA
 
Protein sequence
MAQIAIVGGH GKIARLLIPL LVARGDTPVA LIRNPEHAPD VRDAGGVPRL LDIEAQDAAA 
FAGAFGRADA VVFAAGAGPD GRVDRKTSVD LQGALKSIEG ARSAGVRRFV QVSAIGVDEP
VGDDATEVWA AYVAAKRDAD AALRDSGLEW TIIRPARLTD SPGTGLVSLA RSLPGGEVPR
ADVAAVLATV LGSPSSVGHQ WDLVGGTTPV LEAVATAIEA ERG