Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcav_0661 |
Symbol | |
ID | 7858462 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beutenbergia cavernae DSM 12333 |
Kingdom | Bacteria |
Replicon accession | NC_012669 |
Strand | + |
Start bp | 737480 |
End bp | 738112 |
Gene Length | 633 bp |
Protein Length | 210 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 643864741 |
Product | thymidylate kinase |
Protein accession | YP_002880685 |
Protein GI | 229819159 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0125] Thymidylate kinase |
TIGRFAM ID | [TIGR00041] thymidylate kinase |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.438198 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGGAGTC AGCCGCCCGG GGTGTTCGTC TCGTTCGAGG GCGGCGACGG CGCCGGCAAG ACGACGCAGC TCGAGCTGCT CGCGACCTGG ATCGAGCAGG CGGGTCGGGA GGTGGTGCGC ACGCGGGAAC CCGGGGGGAC GGCGATCGGC CGCACGCTGC GGGACCTCGT GCTGCACGGC GAGGACGTCG ACGCCCGCAC CGAGGCCCTG CTGTACGCCA CGGACCGCGC GCACCACGTC GCCTCGCTCG TGCGTCCTGC TCTGGCGCGC GGCGCCGTCG TCCTCACCGA CCGGTACGTC GACTCCTCCC TCGCGTACCA GGCCGGCGGG CGCGAGCTGG CGGCGGACGA CGTCCGGCGG CTGTCGATGT GGGCGGTGGA TGGTCTGATG CCGGATGTGA CGATCCTGCT CGACCTCGAC CCGGCACACC TGCCGGCGCG CCTCACCGCC GCTCCGGACC GGCTCGAGCG TGCCGGCAGC GCGTTCCACG TGCGCACCCG TGAGGCGTAC CTGGGGCTCG CGGCGCGCGA GCCGGAGCGC TGGCTCGTGC TCGACGCCGC GCTGGGGCGT GCGGAGCTCG CGGCGCAGGT GCGGGCGCGT GTGGCGCCGC GGCTCGGGAG GACCGGCACG TGA
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Protein sequence | MRSQPPGVFV SFEGGDGAGK TTQLELLATW IEQAGREVVR TREPGGTAIG RTLRDLVLHG EDVDARTEAL LYATDRAHHV ASLVRPALAR GAVVLTDRYV DSSLAYQAGG RELAADDVRR LSMWAVDGLM PDVTILLDLD PAHLPARLTA APDRLERAGS AFHVRTREAY LGLAAREPER WLVLDAALGR AELAAQVRAR VAPRLGRTGT
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