| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_0646 |
|---|
| Symbol | |
|---|
| ID | 7858447 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | - |
|---|
| Start bp | 721121 |
|---|
| End bp | 722026 |
|---|
| Gene Length | 906 bp |
|---|
| Protein Length | 301 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 643864726 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_002880670 |
|---|
| Protein GI | 229819144 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0395] ABC-type sugar transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCACGC TCACGCCCGC TCCCGCCAGC TCCGGCGCCA TGACCGACGG CGACGTGCGG
CACGTCGTGC ACCAGCGGCC CACCCGCCCG TGGACCCGGG TCCCGTTCTA CCTCGTGCTG
TTCGTCCTGT CCGTGGCGTT CTTCGCACCG ATCCTCTGGA TGATCTCGAC GTCGTTCAAG
ACGGCCGGCG ACGCGACGGC GCTCCCGCCG CAGTGGATCC CGCCGGAGTT CTCGACGGAC
GGCTACACGG TGCTCTTCTC CGATCCGCAG GCGCCCGTGC TGCGGTGGCT GGCGAACAGC
GTCCTGGTCG GCGTCGCGCA CACCGTGCTG GTGCTGCTCA CCGCGTCGCT CGCCGCCTAC
TCGCTCGCCC GGATGACCTT CCCCGGCAAG AACGTCGCCT TCGGTCTCAT CGTCAGCACG
ATGTTCGTCC CGGGCTTCGT GTTCCTCATG CCGAACTACC TCATCGTCGA CGCGTTCGAC
TGGCTCGACA CCATGTGGGC CCTCGTGATC CCCGGCGCGG CGTCAGCGTT CGGCGTGTTC
TTCCTCCGGC AGTTCTTCCT CTCGATCCCG GGCGAGCTGG AGGAAGCGGC CGTGCTGGAC
GGCGCGAACC GCTGGCAGAT CTTCTGGCGG GTGGTGCTCC CGCTCTCGAC GGCGCCGCTG
GCGACGCTCG CGGTGCTGTC GTTCCTCGCG AGCTGGAACG ACTTCCTGTG GCCGCTGTAC
GTCCTGTTCA ACCCGGAGAG CCTCACGCTC CCCGCGGGCC TGGCGACGCT CCGCAGCGCG
TACGGGACCG ACTTCCCGGC GATCATGGCC GGAGCCGTGC TCGCGAGCAT CCCGGTCCTG
CTCATCTACG CCTTCGCGCA GCGGTACATC ATCGCGGGCG TCTCCCGCTC GGGTCTCAAG
GGATGA
|
|---|
| Protein sequence | MATLTPAPAS SGAMTDGDVR HVVHQRPTRP WTRVPFYLVL FVLSVAFFAP ILWMISTSFK
TAGDATALPP QWIPPEFSTD GYTVLFSDPQ APVLRWLANS VLVGVAHTVL VLLTASLAAY
SLARMTFPGK NVAFGLIVST MFVPGFVFLM PNYLIVDAFD WLDTMWALVI PGAASAFGVF
FLRQFFLSIP GELEEAAVLD GANRWQIFWR VVLPLSTAPL ATLAVLSFLA SWNDFLWPLY
VLFNPESLTL PAGLATLRSA YGTDFPAIMA GAVLASIPVL LIYAFAQRYI IAGVSRSGLK
G
|
|---|
| |