| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_0642 |
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| Symbol | |
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| ID | 7858443 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Beutenbergia cavernae DSM 12333 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012669 |
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| Strand | - |
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| Start bp | 717586 |
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| End bp | 718341 |
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| Gene Length | 756 bp |
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| Protein Length | 251 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 643864722 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_002880666 |
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| Protein GI | 229819140 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | [TIGR01832] 2-deoxy-D-gluconate 3-dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGGAC CGTTCTCGCT CGCCGGCCGC ACCGCCGTCG TCACCGGCGC CGGTTCGGGC
ATCGGGCGCG CCATCGCGCA CGGTTACGCG CGTGCCGGTG CGCACGTCCT CGCCTGGGGC
CGGACCGACG GCGTCAAGGA GGTCGCTGAC GAGATCGCTG ACGGCGGCGG GTCGGCCGAG
GCGGTCGTGG CCGATCTGGC GGACCTGGAG GGCGCGGCCA ACGTCGCGGA GGAGCTCGCC
GCCACCCGGC GCGTGGACGT GCTCGTGAAC AACGCGGGCA TCATCGCCAG GGCACCCGCG
GAGGAGGTGT CGCTGGGCCG GTGGCGCGAG GTCCTCACGG TGAACCTCGA CGCCGCCTGG
GTGCTGAGCC GCTCGTTCGG GACCGCGATG CTCGCGCACG GCTCCGGGCG CATCGTCACG
ATCGCGTCGA TGCTCTCGTT CCAGGGCGGC CGGAACGTGG CGGCCTACGC GGCGAGCAAG
CACGCCGTCG TCGGGCTGAC GCGTGCCCTG GCGAGCGAGT GGGCGGGCCG CGGCGTCGGG
GTCAACGCCC TCGCGCCGGG GTACGTCGTC ACAGCGAACA CTGCCGCCTT GCGGGCCGAC
GACGAGCGAG CGGCCGAGAT CACCGCGCGG ATCCCGGCGG GCCGGTGGGC GACGCCGGAG
GACATGGTCG GACCCGCGGT GTTCCTCGCC TCCGACGCCG CGTCCTACGT GCACGGTCAG
GTGCTCGCCG TCGACGGCGG CTGGCTCGCC TCCTGA
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| Protein sequence | MTGPFSLAGR TAVVTGAGSG IGRAIAHGYA RAGAHVLAWG RTDGVKEVAD EIADGGGSAE
AVVADLADLE GAANVAEELA ATRRVDVLVN NAGIIARAPA EEVSLGRWRE VLTVNLDAAW
VLSRSFGTAM LAHGSGRIVT IASMLSFQGG RNVAAYAASK HAVVGLTRAL ASEWAGRGVG
VNALAPGYVV TANTAALRAD DERAAEITAR IPAGRWATPE DMVGPAVFLA SDAASYVHGQ
VLAVDGGWLA S
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