Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcav_0628 |
Symbol | |
ID | 7858429 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beutenbergia cavernae DSM 12333 |
Kingdom | Bacteria |
Replicon accession | NC_012669 |
Strand | + |
Start bp | 700218 |
End bp | 700571 |
Gene Length | 354 bp |
Protein Length | 117 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 643864708 |
Product | anti-sigma-factor antagonist |
Protein accession | YP_002880652 |
Protein GI | 229819126 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) |
TIGRFAM ID | [TIGR00377] anti-anti-sigma factor |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGCTGA CGGTGGCGGG AACCGACCGG TCGGGGGTGC CGGTCGTCTC GGTCACGGGC GAGGTCGACG TGTACACGGG ACCCGTCCTG CGCGAGGAGC TGGAGAAGGC CCTGGCGCGC GGCACGACCG GCGTCGTCGT CGACCTCAGC GGGGTGGCGT TCATCGACTC CACGGGCCTC GGGGTCCTCG TCACGGCCCA CCGTCAGCTG GCCTCGCGCG GCGGCCGCCT CCACGTGTGC GCCCCCGAGG GGAAGATCAC CTCGGTCATC GCCCTCACCG GGCTCGACGC CGTGCTGGCG GTGCACAGCG CGCTCGACGA CGCCGTGCAC GCCGCGGCGC CCGCCTCCGC CTGA
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Protein sequence | MELTVAGTDR SGVPVVSVTG EVDVYTGPVL REELEKALAR GTTGVVVDLS GVAFIDSTGL GVLVTAHRQL ASRGGRLHVC APEGKITSVI ALTGLDAVLA VHSALDDAVH AAAPASA
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