Gene Bcav_0628 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_0628 
Symbol 
ID7858429 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp700218 
End bp700571 
Gene Length354 bp 
Protein Length117 aa 
Translation table11 
GC content75% 
IMG OID643864708 
Productanti-sigma-factor antagonist 
Protein accessionYP_002880652 
Protein GI229819126 
COG category[T] Signal transduction mechanisms 
COG ID[COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) 
TIGRFAM ID[TIGR00377] anti-anti-sigma factor 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGCTGA CGGTGGCGGG AACCGACCGG TCGGGGGTGC CGGTCGTCTC GGTCACGGGC 
GAGGTCGACG TGTACACGGG ACCCGTCCTG CGCGAGGAGC TGGAGAAGGC CCTGGCGCGC
GGCACGACCG GCGTCGTCGT CGACCTCAGC GGGGTGGCGT TCATCGACTC CACGGGCCTC
GGGGTCCTCG TCACGGCCCA CCGTCAGCTG GCCTCGCGCG GCGGCCGCCT CCACGTGTGC
GCCCCCGAGG GGAAGATCAC CTCGGTCATC GCCCTCACCG GGCTCGACGC CGTGCTGGCG
GTGCACAGCG CGCTCGACGA CGCCGTGCAC GCCGCGGCGC CCGCCTCCGC CTGA
 
Protein sequence
MELTVAGTDR SGVPVVSVTG EVDVYTGPVL REELEKALAR GTTGVVVDLS GVAFIDSTGL 
GVLVTAHRQL ASRGGRLHVC APEGKITSVI ALTGLDAVLA VHSALDDAVH AAAPASA