Gene Bcav_0604 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_0604 
Symbol 
ID7861068 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp670856 
End bp673357 
Gene Length2502 bp 
Protein Length833 aa 
Translation table11 
GC content70% 
IMG OID643864684 
Productglycosyl transferase family 51 
Protein accessionYP_002880628 
Protein GI229819102 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0744] Membrane carboxypeptidase (penicillin-binding protein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0810058 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATCAC CCCGCCGGTC GACCTCGCGC GCCGTCAACC CGGTCCAGCT GGTGTCGCTC 
CTCGTCGCCT ACCTCCTGGT GGCCGGCGCG GGCGGCGTCC TGACCGCAGG ACTCGTCATG
CCGGCCATCG CGGCCGCCGG CGCGACGTCC GAGGCAGGCA ACCAGCTGTT CGACGACCTG
CCGACCGAGC TCGGGCCGCA GACGCCGTCG GAGCGCACCA CGATCCTCGC GGCCGACGGC
TCGCACCTCG CGACGTACTA CGCGCGGAAC CGGATCGTCG TGCCGCTGGA CCAGATCTCC
CAGTACATGC GCGACGCCGT CGTCGCCACG GAGGACCGGC GCTTCTACGA GCACAGCGGC
GTCGACATCG AAGGCATCAT GCGCGGTGCG GTGAGCACGC TCTCGGGCGA CATCCAGGGG
GCGTCGACGC TCACGCAACA GTACGTGAAG AACGTGCTCA TCGAGGCCGG CGACGTGGCT
GGCGACGAGG AGGCGATCGA GGCCGCGCGC GAGACCAGCC TCGGCCGCAA GCTCCGCGAG
GCCAAGCTCG CGATCGCGCT CGAGAAGGTC ATGACGAAGG ACCAGATCCT CGAGGGCTAC
CTCAACATCG CGCAGTTCGG CGCGAGCCAG TACGGCGTCG AGGCCGCGTC CCAGTTCTAC
TTCGGGCACA GCGCGGCGGA CCTGACGCTG CCCGAGGCGG CACTCATCGC GGGCATCACG
CAGTCGCCGG GCAAGTACGA CCCGGTCCGC GACGAGGCGA ACGGCTACGA GAACTCGACC
AACCGCCGCA ACACCGTGCT GTACCTGATG TTCCAGCAGG GATACATCAC GCAGGAGGAG
CACGACGCGG CGGTGGCGAT CGCCGTCCCG GACATGCTCC ACATCACCCA GACACCCGTC
GGGTGCCAGA CCGCGGGCGG CGGCGTCAGC GCGTTCTTCT GCCAGTACGT CACCGAGGTC
CTCCTCAACG ACCCGATCCT CGGGGAGACC GAGGAGGAGC GGCGCCAGGC GCTGAACCGT
GGCGGCCTGA CCGTCACGAC GACGCTGCAG CCGCCGGCCC AGCAGGCGGC GTACGACTCG
CTCACCGGGC GCGTGCCGGT CAACGACCCC TCGTACAACT CCCGTCAGGG CGAGCTCGGC
GTGAGCGGCG CGATCTCGAC GGTCGAGCCG GGCACGGGGA ACATCGTCGC GATGGTGCAG
AACACGCCGT TCGGCCAGCC CACGGCTGAG CAGCCACGCG CGACGCGCGT GAACTACAAC
GTCGACCGCG CCTACGGCGG CGGCGACGGC TTCCAGACCG GATCCACGTT CAAGGCGTTC
GTGCTGACGC AGTGGCTCAT CGACGGGCAC ACGCTCAGCG ACGTCGTCAA CGGCTCGAAC
GGGCAGGTGT TCCCGGCGAA TTCGTGGACG ATCTCGTGCT ACCCGAACGC CGTCTCGTCG
TGGCCGCCGA AGAACCTCGA GAGCGGCGCG AGCGGGCAGA TGACCGTGCT GCGCGCGACG
CAGGAGTCCA TCAACACGGC GTTCGCCTAC ATGGCGAACC AGGACATGGA CCTGTGCGCG
CTCCGCGACA CCGCGGCGCG GATGGGCGTG CACGTCGGGA CCGGCACGGT GCAGCCCAAC
GGCCAGGCGC TGTTCGACTC GCAGGCCGGC GAGGCGATGC TCACGACGCC GTCGATGGTC
CTGGGCGCGA ACACGATCGC TCCGCTGACC ATGGCCGCGG CGTTCGCGAC GTACGCGTCC
GGCGGCGTCT ACTGCGAGCC GCGAGCGATC ACGAGCATCA CCGACACGAA CGGCGAGGCG
ATCCCCGTGC CTGAGCCGGA GTGCAGCCAG GCGCTCGAGC CGCACATCGC CGCGGCGGCG
ACGTACGCCA TGCAGCAGGT GGTGCAGAAC GGCACCGCGA CGTCGGCGCA GATCGGGCGG
CCCCTCGCCG GCAAGACCGG CACGGCGAAC GACGACTACC ACGCGTGGTT CATCGGGTAC
ACGCCGCAGC TCGCGACGGC GGTCTGGACC GGTCACCACG AGGGCAACAT CTCGATGTTC
GACTCGGTGA TCAACGGCCG GTACTACTCG CAGGTGTTCG GTGGCGCGCT GCCGGCGCCG
ATCTTCAGCG ACTACATGAG CCAGGTCATG GCGCCGTACC CGGTGGAGGA CTTCCCTCGG
GCCGGAGAGC GCGAGATCTA CGGCGACCTC GTCCAGGTGC CGGGCGTCAT CGGGCAGGAT
CTCGCGGCCG CCCAGCAGAC GCTGACCGCT GCTGGGTTCC AGGTGCAGGT GGCCGAGCCC
GTGACGTCGG ACCAGGCGGC GGGCACCGTC GCGGAGATGG ACCCGGCGGA GGGCTCGCGG
GTGCGCCCGG GCACGACGAT CACGCTGCGT CCGAGCAGCG GGCCTGAGGA AGAGGAAGAG
GACGACGACG ACCGCGGCAA CCTCCCGCCG GTCATCCCGC CCGGCGGAGG CGACGACGAC
GACCGCGGCG GCGGGGGCGG CAACGGCGGA GGGGACAACT GA
 
Protein sequence
MASPRRSTSR AVNPVQLVSL LVAYLLVAGA GGVLTAGLVM PAIAAAGATS EAGNQLFDDL 
PTELGPQTPS ERTTILAADG SHLATYYARN RIVVPLDQIS QYMRDAVVAT EDRRFYEHSG
VDIEGIMRGA VSTLSGDIQG ASTLTQQYVK NVLIEAGDVA GDEEAIEAAR ETSLGRKLRE
AKLAIALEKV MTKDQILEGY LNIAQFGASQ YGVEAASQFY FGHSAADLTL PEAALIAGIT
QSPGKYDPVR DEANGYENST NRRNTVLYLM FQQGYITQEE HDAAVAIAVP DMLHITQTPV
GCQTAGGGVS AFFCQYVTEV LLNDPILGET EEERRQALNR GGLTVTTTLQ PPAQQAAYDS
LTGRVPVNDP SYNSRQGELG VSGAISTVEP GTGNIVAMVQ NTPFGQPTAE QPRATRVNYN
VDRAYGGGDG FQTGSTFKAF VLTQWLIDGH TLSDVVNGSN GQVFPANSWT ISCYPNAVSS
WPPKNLESGA SGQMTVLRAT QESINTAFAY MANQDMDLCA LRDTAARMGV HVGTGTVQPN
GQALFDSQAG EAMLTTPSMV LGANTIAPLT MAAAFATYAS GGVYCEPRAI TSITDTNGEA
IPVPEPECSQ ALEPHIAAAA TYAMQQVVQN GTATSAQIGR PLAGKTGTAN DDYHAWFIGY
TPQLATAVWT GHHEGNISMF DSVINGRYYS QVFGGALPAP IFSDYMSQVM APYPVEDFPR
AGEREIYGDL VQVPGVIGQD LAAAQQTLTA AGFQVQVAEP VTSDQAAGTV AEMDPAEGSR
VRPGTTITLR PSSGPEEEEE DDDDRGNLPP VIPPGGGDDD DRGGGGGNGG GDN