| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_0588 |
|---|
| Symbol | |
|---|
| ID | 7861051 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | - |
|---|
| Start bp | 650470 |
|---|
| End bp | 651084 |
|---|
| Gene Length | 615 bp |
|---|
| Protein Length | 204 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | 643864668 |
|---|
| Product | two component transcriptional regulator, LuxR family |
|---|
| Protein accession | YP_002880613 |
|---|
| Protein GI | 229819087 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.311075 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGCCAC CGATCCGGGT GCTCGTCGCG GACGACGAGG AGCTGATCCG CGACGCGCTC
GTCGGGCTCC TGGAGCGCGA GGCGGACATC GACGTCGTGG CGACGGCCGC CGACGGGCGG
CGGGCGATCG ACGCGGCGCT CGCGCACCGC CCCGACGTCG CCGTCGTCGA CCTCCAGATG
CCCGTGCTCG ACGGCCTCGC CGTGATCGCC GAGCTCGGCC GCGCCCTGCC CGCCTGCGCG
GGCGTCATCC TCACCGGTCA CGGCCGGCCC CGGGTGCTGC ACCAGGCCCT CGCGTCGGGG
GCGCGCGGCT TCCTCGCGAA GGGCGCGCCG GGGACGGCGC TGGCCGACGT CGTCCGGCGC
GTGCACGAGG GCAACCGGTA CGTCGACCCG GTCCTCGCCG CGGACGCCCT CACCGCACCG
CCGTCGCCGC TGACGCCGCG CGAGACAGAA GTGCTCGCCG CCGCCCGTGA GGACCGCCCG
ATCCGCGACG TCGCCGGCCA GCTCTTCCTC TCCCCGGGCA CCGTGCGCAA CTACCTCGCC
GCCGTCACCG CCAAGCTCGC GGCGTCGTCC CGTGCTGACG CCTACCGCAC GGCGCGGGAG
AACGGCTGGA TCTGA
|
|---|
| Protein sequence | MTPPIRVLVA DDEELIRDAL VGLLEREADI DVVATAADGR RAIDAALAHR PDVAVVDLQM
PVLDGLAVIA ELGRALPACA GVILTGHGRP RVLHQALASG ARGFLAKGAP GTALADVVRR
VHEGNRYVDP VLAADALTAP PSPLTPRETE VLAAAREDRP IRDVAGQLFL SPGTVRNYLA
AVTAKLAASS RADAYRTARE NGWI
|
|---|
| |