Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcav_0584 |
Symbol | |
ID | 7861047 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beutenbergia cavernae DSM 12333 |
Kingdom | Bacteria |
Replicon accession | NC_012669 |
Strand | + |
Start bp | 647558 |
End bp | 648253 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 643864664 |
Product | transcriptional regulator, GntR family |
Protein accession | YP_002880609 |
Protein GI | 229819083 |
COG category | [K] Transcription |
COG ID | [COG1802] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.525368 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCACGG TCCCCTCGCC CGCTCCCTCC ACCGCGCCGC GCGTCGTGAC AGCGCGCGCG GCCCTGCGGG ACCGCATCGT CAGCTCGCTG CGCCAGCAGA TCATCGACGG CGACCTGCGG GCGGGGACCC GACTGCACGA GCGGGACCTC TCGGAACGCT TCGGCGTCTC GCGGGTCCCG GTGCGGGAGG CGATCATCAC GCTCAGCGGT GAGGGCCTGG TGGACGTGCA GCCCGGCGTC GGCGCGTTCG TCACGCCGCT GACGCGTCAG AACGTGCGGG AGGTCTTCGA GATCCGCGCC GCGCTCGAAC CGATGGCGGC GCGGCTCGCG GCGTTGCGCT GCACGGCGGA CCACCTGGCG ACCCTGCAGG CGCTGGTCGC CGGCGCACGG GACGCCGCCC GGGTGCACGA TGCGGCGGCC GGCGCGCGGG CGAACGCGGA CTTCCACGAG ATGCTGTTCC GGGCCACCGG GAACGACCTG CTGCAGACGA TGGTGCCCGC CCTGGACGTG ATGACGCGGC GGCTCTTCCC CAAGAACATC GTCCATCACG AGGCGATGAT GTGGCAGGAC CACGAGGCGA TCACGCGCGC GATCGAGCTG GGCGACGCGG AGCGCGCAGC CGAGCTCGCA GCAGCCCACC TCGAGAACAC GCGCCGCCAC ACGTTCGAGA TGTTCGAGCG CGACGCCGAG CTGTAG
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Protein sequence | MSTVPSPAPS TAPRVVTARA ALRDRIVSSL RQQIIDGDLR AGTRLHERDL SERFGVSRVP VREAIITLSG EGLVDVQPGV GAFVTPLTRQ NVREVFEIRA ALEPMAARLA ALRCTADHLA TLQALVAGAR DAARVHDAAA GARANADFHE MLFRATGNDL LQTMVPALDV MTRRLFPKNI VHHEAMMWQD HEAITRAIEL GDAERAAELA AAHLENTRRH TFEMFERDAE L
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