Gene Bcav_0548 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_0548 
Symbol 
ID7857914 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp603777 
End bp606302 
Gene Length2526 bp 
Protein Length841 aa 
Translation table11 
GC content77% 
IMG OID643864628 
ProductDNA polymerase III, subunits gamma and tau 
Protein accessionYP_002880573 
Protein GI229819047 
COG category[L] Replication, recombination and repair 
COG ID[COG2812] DNA polymerase III, gamma/tau subunits 
TIGRFAM ID[TIGR02397] DNA polymerase III, subunit gamma and tau 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCACAG CCCTGTACCG CCGGTACCGT CCGGACACGT TCGCGGACGT CATCGGGCAG 
GAGCACGTCA CGGGTCCGCT CATGGCGGCG CTGCGGTCCG ATCGCGCCAC GCACGCGTAC
CTGTTCTCCG GTCCGCGAGG CTGCGGCAAG ACGACGTCGG CCCGGATCCT CGCGCGGTGC
CTCAACTGTG CGCAGGGACC GACGGACACG CCGTGCGGCA CGTGCGACAG CTGTGTCGAG
CTGGCGCGTG GCGGGCCGGG CAGCCTCGAC GTCGTCGAGA TCGACGCCGC GAGCCACAAT
GGTGTCGACG ACGCCCGTGA CCTGCGCGAA CGCGCCGTCT TCGCCCCGGC GCGCGACCGC
TACAAGATCT TCATCCTCGA CGAGGCGCAC ATGGTGACGG CGCAGGGGTT CAACGCGCTG
TTGAAGCTCG TCGAGGAGCC GCCGCCGCAC GTGAAGTTCG TGTTCGCGAC GACGGAGCCG
GACCGCGTGA TCGGCACGAT CCGCTCGCGC ACGCACCACT ACCCGTTCCG GCTCGTTCCC
CCGCAGGTGC TCGGCGACTA CCTGGCTCAG GTGAGCGAGG CGGAGGGGGT GGCCGTGGCC
CCGGGCGTCC TGCCGCTGGT CGTTCGCGCC GGTGGGGGAT CGGTCCGGGA CTCGATGTCG
GTGCTGGACC AGCTCATGGC CGGTGCGGAC TCCGATGGCC TCGACTACGA CCGCGCGATC
GCGCTCCTCG GGTTCACCCA CGCGACCCTG CTGGACGACG TCGTCGACGC GTTCGCCGCC
GGCGACGGCG CCACGGTGTT CCGGGTGATC GACAACGTGA TCGAGTCGGG GCACGACCCG
CGCCGATTCG TCGAGGACCT GCTCGAGCGG CTGCGCGACC TCATCGTCCT CGCCGCCGCA
GGCGACCAGG CCGTCGCGGT GCTCCGCGCC ATCCCGGAGG ACCAGGTCGA ACGGATGCGC
GGCCAGGCGC AGCACCTCGG CGCCGCGCGA CTGTCGCGAG CCGCCGACCT GGTCAACGCT
GGGCTCACGG AGATGACCGG GGCGACGTCG CCGCGGCTGC AGCTCGAGCT GCTGTGCGCG
CGCATCCTTC TGCCCGCGAC GCCTGCGGCC GCGACGGGGG TGGAGCCGCG CTCCGCCGGC
ACGTCCGGCC CCGCCTCCGG CTCTGCGCCC TCCGGCGGCG CCGGGTCTGC CGCCGGTGCC
GCGCCTTCGC GGCGCGAGAC GCCGGCGCAG CCCGTGCCCC GCACCGAGCG GCCACCGGCT
CCGGAGCGAG GGGCGCCGAG CCGGGCGGCG GCCGAGCCGC CCGCGGCGTC GGCCGCTCGC
GGTGAGCGGG AGCGCGGCTC GGCGGCGCGC GCTGCGGACG AAGCGGGTCC CGAGTCGGCT
GGGTCGGTGG CGTCGGGGTC CGCGGAGGCC GAACCGGGGG CGGCCCGTCG CGGAGCGCCC
GCCACCGATG CGCCCGCGCG ACGCCAGCAG CCCGACGCGC GCCCGGGTGG AGGCGATGAC
GTCGAGGGCC GTGGCGCTGG GGCCGGGCCG GAGGCCGAGG AGGCGCCTGG ATCCGCGGAG
CCGCCTCGCT CGGAGGTGTC GGACGAAGAG GCGCCTCGCT CCGGGGAGCC GGCCGCCGGG
CAGTCTCGCT CGGAGGTGTC GGACGAAGAG GCGCCTCGCT CCGAGGTCCC GGCCGAAGGG
CCGCCCCATC CGCAGGAGGC AGCCGCCGGG CGGACTCCGT CCGAGGCGCC CGCCGCCGGT
CCGGTGTCCG CGGCCCCGCA GCCCGACCCC TCCCCGCTCA CCGGCACGGA CGCCGCCACC
GTCAGGCGCC GCTGGCCCGA GGTGCTCGAG ACCCTCTCCG GGATCCGGCG CGTGACGTGG
ACGCTGGTCG CGCAGAACGC GCAGGTCGCC TCGATCTCCG CGGGCGTGCT CGAGCTGGCG
TTCGCGACCG AGGGCCTCGC CGTCACGTTC CGCAACGGGA CCCACGCGGA GGCTCTGGAG
CGTGCGCTGC ACGAGACGCT CGGCCTCGAC GTGCGGGTCC GGGCGACGAT CGGCGACGCG
GCGCCGACGT CGCCCCCGGC CGGCGGGACG TCGGGCGGAG CGGGTGCACC TGACGCGCCG
GGCAGCGCGG GCGCCGGTGA CCCGGCAGCG CGCGCCGCGG CCGACTGGGC CGCGCCGGTG
GCTCGGCTCG ACCCGCCGGA GCCTCCCGCG GGGGGCTCGG CTCCCGCTCC AGCCGATCCC
GGGAGCACCC CGGCGCCCGG AGCGGCATCC CAGGCGAGGG CATCGGGCAC CTCCGACGCG
CGCCCGACCC AGGCGCGTGC CCCCCGCACC ACCGACGCGC GCCCGACCCA GGCGAGGACG
ACCGCGGAGG CGCCACCCGC CGTCGTCGGC CCTGACGACC CCTGGCCGTC CGACGAGGAC
GACGACCCTG GTGAGCCCGG GGCGGGCAGC GGGCTCGTGG GTGCTCCCCT CGTCGCGCGC
CTGCTCGGCG GCACGGTCAT CGACGAGGTC GCCGACGGCC CGGGCGGCCC GCGCCCCGGC
CCGTAG
 
Protein sequence
MTTALYRRYR PDTFADVIGQ EHVTGPLMAA LRSDRATHAY LFSGPRGCGK TTSARILARC 
LNCAQGPTDT PCGTCDSCVE LARGGPGSLD VVEIDAASHN GVDDARDLRE RAVFAPARDR
YKIFILDEAH MVTAQGFNAL LKLVEEPPPH VKFVFATTEP DRVIGTIRSR THHYPFRLVP
PQVLGDYLAQ VSEAEGVAVA PGVLPLVVRA GGGSVRDSMS VLDQLMAGAD SDGLDYDRAI
ALLGFTHATL LDDVVDAFAA GDGATVFRVI DNVIESGHDP RRFVEDLLER LRDLIVLAAA
GDQAVAVLRA IPEDQVERMR GQAQHLGAAR LSRAADLVNA GLTEMTGATS PRLQLELLCA
RILLPATPAA ATGVEPRSAG TSGPASGSAP SGGAGSAAGA APSRRETPAQ PVPRTERPPA
PERGAPSRAA AEPPAASAAR GERERGSAAR AADEAGPESA GSVASGSAEA EPGAARRGAP
ATDAPARRQQ PDARPGGGDD VEGRGAGAGP EAEEAPGSAE PPRSEVSDEE APRSGEPAAG
QSRSEVSDEE APRSEVPAEG PPHPQEAAAG RTPSEAPAAG PVSAAPQPDP SPLTGTDAAT
VRRRWPEVLE TLSGIRRVTW TLVAQNAQVA SISAGVLELA FATEGLAVTF RNGTHAEALE
RALHETLGLD VRVRATIGDA APTSPPAGGT SGGAGAPDAP GSAGAGDPAA RAAADWAAPV
ARLDPPEPPA GGSAPAPADP GSTPAPGAAS QARASGTSDA RPTQARAPRT TDARPTQART
TAEAPPAVVG PDDPWPSDED DDPGEPGAGS GLVGAPLVAR LLGGTVIDEV ADGPGGPRPG
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