| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_0515 |
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| Symbol | upp |
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| ID | 7857879 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Beutenbergia cavernae DSM 12333 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012669 |
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| Strand | - |
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| Start bp | 572186 |
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| End bp | 572821 |
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| Gene Length | 636 bp |
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| Protein Length | 211 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 643864593 |
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| Product | uracil phosphoribosyltransferase |
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| Protein accession | YP_002880540 |
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| Protein GI | 229819014 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0035] Uracil phosphoribosyltransferase |
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| TIGRFAM ID | [TIGR01091] uracil phosphoribosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00743886 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGTGTGC ACGTCGCCGA CCACCCTCTG GTGGCCCACA AGCTCACCGT CCTGAGGGAC
GAGCGGACCG ACTCCCCGAC GTTCCGGCGT CTCACCGAGG AGCTCGTCAC GCTCCTCGCG
TACGAGGCGA CGCGCGACAT CGCCGTCGAG CCCCGTGAGA TCACGACGCC GGTGACGACG
ACGGTCGGCG TGCACCTGCG GTCGCCGCGG CCGATGGTGG TACCGATCCT GCGTGCCGGG
CTCGGCATGC TCGAGGGCAT GACCCGCCTG CTGCCGACGG CGGAGGTCGG GTTCCTCGGG
CTGCAGCGGG ACGAGGAGAC CCTCGAGGCG ATCACGTACG CCAACCGCCT CCCGGACGAC
CTCTCCGGTC GGCAGTGCTT CGTGCTCGAC CCGATGCTCG CGACGGGCGG CACGCTCGTC
GCGAGCATCG AGTACCTGTT CCTGCGCGGC GCACGTCACG TGACGGCGAT CTGCCTCCTC
GCGGCGCCGG AGGGTCTGCG GACGGTGGAG GACGCCGTCG GCGACCGCGC CGACGTGACC
ATCGTGACCG CCGCCGTCGA CGAGCGGCTC AACGAGCGGG GCTACATCGT GCCCGGGCTC
GGCGACGCCG GCGACCGCCT CTACGGCGTC GTCTGA
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| Protein sequence | MRVHVADHPL VAHKLTVLRD ERTDSPTFRR LTEELVTLLA YEATRDIAVE PREITTPVTT
TVGVHLRSPR PMVVPILRAG LGMLEGMTRL LPTAEVGFLG LQRDEETLEA ITYANRLPDD
LSGRQCFVLD PMLATGGTLV ASIEYLFLRG ARHVTAICLL AAPEGLRTVE DAVGDRADVT
IVTAAVDERL NERGYIVPGL GDAGDRLYGV V
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