Gene Bcav_0482 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_0482 
Symbol 
ID7861866 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp537670 
End bp538638 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content73% 
IMG OID643864560 
ProductABC transporter related 
Protein accessionYP_002880507 
Protein GI229818981 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTCGTC ACCACGCCGA CGACGGCGTC CCGCCCGTCG TCGAAGTCCG TCACCTGCGC 
AAGTCCTACG GCGAGAAGGT CGCCGTCCAG GACGTCAGCT TCGCCGTCGC CCCCGGGGAG
ATCTTCGGGA TCCTCGGGCC GAACGGCGCC GGCAAGACCA CGACCGTCGA GGCGATCGCC
GGCCTGCGGC ACGCCGACTC CGGCGACGTC CGCGTCCTCG GCATCGACAC GCAGGCGGAG
CCGGACCGGA TCCGCACCGC GCTCGGCATG CAGCTGCAGG AGTCGGCGTT GCCCGAACGC
ATCACCGTGC GCGAGGCGAT CGACCTGTAC GGGTCGTTCT ACCCGGACCC CATGCCGACC
GAGCAGCTGA TCGACATGCT CGACCTGCGC GACCGCGCGG GCGCCCGGTA CGCCGCGCTC
TCGGGCGGGC AGAAGCAGCG GCTGTCGATC GCGCTCGCGC TCGTCGGCCG CCCCCAGGTC
GCGATCCTCG ACGAGCTGAC CACGGGCCTC GACCCCGCCG CACGCCGCGC GACGTGGGAC
CTCATCGAGA CCGTCCGGGA CTCCGGCGTG ACGATCCTGC TCGTCACGCA CTTCATGGAC
GAGGCGGAGC GGCTGTGCGA CCGGCTCGTC GTGATCGACG GCGGACGCAT CGTCGCCGAG
GGCTCGCCGG CGGAGCTGGT GTCCGGCGAC GGCGAGCTGC GCACCATCCA CGTCCGTCTC
GCCGAGGCGC CGTCGGCGGC CGTCCTCGAG GCCCTGCGCG CCGCGCCCGA CGTCGCCACG
GTGACCGGCG ACGGCCTCGA CCTCGAGATC CGCGGTGGAC GGCGCGTGCT GCCCTCCGCC
GTCGCCGCCC TCGACGCCGC CGGCATCGTG CCCGAGTCCC TTCGGACCGG CGCCCGTTCG
CTCGAGGACG TCTTCGTCGG GCTCATCAGC CACGACGACA CCCCCGCCCA GGAAGGAGCC
CACCCATGA
 
Protein sequence
MARHHADDGV PPVVEVRHLR KSYGEKVAVQ DVSFAVAPGE IFGILGPNGA GKTTTVEAIA 
GLRHADSGDV RVLGIDTQAE PDRIRTALGM QLQESALPER ITVREAIDLY GSFYPDPMPT
EQLIDMLDLR DRAGARYAAL SGGQKQRLSI ALALVGRPQV AILDELTTGL DPAARRATWD
LIETVRDSGV TILLVTHFMD EAERLCDRLV VIDGGRIVAE GSPAELVSGD GELRTIHVRL
AEAPSAAVLE ALRAAPDVAT VTGDGLDLEI RGGRRVLPSA VAALDAAGIV PESLRTGARS
LEDVFVGLIS HDDTPAQEGA HP