| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_0480 |
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| Symbol | ligC |
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| ID | 7861864 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Beutenbergia cavernae DSM 12333 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012669 |
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| Strand | + |
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| Start bp | 535733 |
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| End bp | 536848 |
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| Gene Length | 1116 bp |
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| Protein Length | 371 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 643864558 |
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| Product | ATP-dependent DNA ligase |
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| Protein accession | YP_002880505 |
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| Protein GI | 229818979 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1793] ATP-dependent DNA ligase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCCTGC CGCTGACCTC GCCGATCGAC CCGATGCTCG CCAAGTCCGT GCGCGGCGTT
CCCGACGCCG ACGCCGTCCC CGGCGGGTAC GCGTACGAGC CGAAGTGGGA CGGCTTCCGC
ACGATCGTGT TCGCCGACGA CGGCGACGTC GAGCTGCAGA GTCGCAACGG CAAGCCGATG
ACGCGGTACT TCCCGGAGAT CGTGGACGCC GTGAAGGCGG AGCTGCCGGC GCGGTGCGTG
GTCGACGGCG AGGTCGTGCT CTCGCGCGGC GGACGCCTCG ACTTCGAGCT CCTCGGGCAG
CGCATCCACC CGGCGGCGTC GCGCGTGAAG ATGCTCGCGG AGCACGCGCC GGCCGCGCTG
GTGGTGTTCG ACCTGCTCGC GCTCGGCGAC GACGACCTCA CCCAACGCCC GTTCGCGGAG
CGCGCGGCCG CCCTCGACGA GCTCGGCCTC GACGGCCCGT CCGTCCACGT CACGCCGCGC
ACGCGCGACG CCGACGTCGC CCGCGAGTGG TTCACGACGT ACGAGGGGGC GGGGCTCGAC
GGCGTCGTCG CCAAGCCGCT GGACGGCGCG TACGAACCCG GGAAGCGCGC GATGCTCAAG
ATCAAGCACG AGCGCACGGC CGACGTCGCC CTCGCCGGGT ACCGCCTCCA CAAGACGTCG
ACCGACGAGC GGCCGCTCAT CGGTTCCCTC CTCCTCGGCC TGTTCGACGA CGGCGGCGAC
CTGCGGTTCG TGGGCGTCTC GGCGTCGTTC CCGGCCGCCC GCCGGGCCGA GCTGTACGAC
GAGCTGCAGG AGCTGCGCGT GGGCGAGGGG GACGAGCACC CGTGGGGCAA CTGGCAGCAG
CCCGAGGGCA GCAGGCGGCC CGGCGCCGTG TCGCGGTGGA ACGCCGGGAA GGACCTGTCG
TTCACCGCGC TGCGCGTGGA GCGCGTGCTC GAGGTGGGCT ACGACCACAT GGAGGGCGAC
CGGTTCCGCC ACACGGCGCA GTTCAAGCGC TGGCGCCCGG ACCGGGAGCC GACCTCGTGC
ACGTACGCAC AGCTCGACGA GGCCGTGGGC TACGACCTCG CCGAGCTGCT GCCCGGTGCC
CCGACCGCGG CACCGGGCTT CACCGGCGCG CTCTGA
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| Protein sequence | MALPLTSPID PMLAKSVRGV PDADAVPGGY AYEPKWDGFR TIVFADDGDV ELQSRNGKPM
TRYFPEIVDA VKAELPARCV VDGEVVLSRG GRLDFELLGQ RIHPAASRVK MLAEHAPAAL
VVFDLLALGD DDLTQRPFAE RAAALDELGL DGPSVHVTPR TRDADVAREW FTTYEGAGLD
GVVAKPLDGA YEPGKRAMLK IKHERTADVA LAGYRLHKTS TDERPLIGSL LLGLFDDGGD
LRFVGVSASF PAARRAELYD ELQELRVGEG DEHPWGNWQQ PEGSRRPGAV SRWNAGKDLS
FTALRVERVL EVGYDHMEGD RFRHTAQFKR WRPDREPTSC TYAQLDEAVG YDLAELLPGA
PTAAPGFTGA L
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