| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_0466 |
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| Symbol | |
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| ID | 7860726 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Beutenbergia cavernae DSM 12333 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012669 |
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| Strand | + |
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| Start bp | 519540 |
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| End bp | 521267 |
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| Gene Length | 1728 bp |
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| Protein Length | 575 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 643864544 |
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| Product | drug resistance transporter, EmrB/QacA subfamily |
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| Protein accession | YP_002880491 |
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| Protein GI | 229818965 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.614591 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0769795 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGCCA CCACGGCAAG CACCGCACCA ACGACCGACA CGGACTCCGA CGCCGAGCAC
AAGCAGATCC TGCGCGTGCT CGTGGGTCTG CTGCTCGCAC TCTTCGTCGC GATGCTCTCG
GGCACGATCG TCGCGAACGC GCTGCCCGTG ATCATCGCCG AGCTCGACGG CACGCAGCAG
CAGTACACGT GGGTCGTGAC CGCGACGCTG CTGGCGTCGA CGGCGGTGAC GCCGTTGTTC
GGCAAGCTCG CCGACCTGTA CGACAAGAAG AAGCTGCTCC TCATCGGCAT CGGGATCTTC
GCCGTCGGCT CCCTGCTGTC CGGTCTGTCC ACGAGCGCGG GGATGCTCAT CGGGTTCCGC
GTGATCCAGG GCGTCGGGCT CGGCGCGCTG CAGGCGCTCG TGCAGATCAC CATCGCGACG
ATCATCTCGC CGCGGCAGCG CGGCCGGTAC GCCGGCTACA TGGGCGCCGT CATGGCGTTC
GCGACGGTCT CCGGGCCGCT GCTGGGCGGC CTCATCGTCG ACGTCAGCTG GCTCGGCTGG
CGCTGGTGCT ACTGGAGCGC GATCCCGCTC GCCCTCATCG CCATGGTCGT GCTGGCCCGG
CGCCTGCACG TGCCGCCGCC GTCCCGCACC GAGGTGAAGG TCGACTGGCT CGGCGCCACG
CTCATCTCGG CCGCCGTCAC GCTGCTGCTG CTCTGGGTCT CGTTCGCCGG CCCGACCCAC
TCCTACGACT GGATCTCCTG GCAGACCGCC GTCATGGTGC CCGGTGCCCT CGCCCTGTTC
GGCCTGTTCA TCTGGGTGGA GTCGCGCGTG GCAGAGCCGA TCGTGCCGCT CTGGATCCTC
AGGGAGCGGA CGACGACGCT CGCGATCGTC GCGTCGATCG CCGTCGGTGT CGGGATGTTC
GGCGCGAGCG TCTTCCTCGG CCAGTACTTC CAGATCGCCC GCGGGTACTC GCCCACCGAG
GCCGGCCTGC TGACGATCCC GATGATGCTC GGCCTGCTGG TCTCCTCGAC CGTCTCGGGG
CGCTTCGTCA CGCAGATCGG GCGCTGGAAG CCGTTTGTCG TCTGGGGACT CGTCACGTTC
ACCGCCGGGA TGGGCCTCCT GGGCTCGATC CAGTACGGCA CGTCCCTGTG GCTGATCGGC
GTGTTCATGC TCGTCGCCGG CATCGGCCTG GGCGCCAGCA TGCAGAACCT CGTGCTCGCC
GTGCAGAACA CGGTGCCGCT GTCCGACATG GGCGCGGCGA CGTCGAGCAT CACGTTCTTC
CGCTCGCTCG GTGGTGCGAT GGGCGTCCAG GTGCTCGGCG CGGTGTTCGC GTCGCACGTC
TCGTCGCTGA CGGCGACCCG GCTCACGGAC GCCGGGATCC CCGTGGCCCC GGGCGGTGAC
GGAGGCGGGA GCCTCGATCT CAGCGAGCTC CCGGACGCCG TCGCCGACAT CATCCGGTCC
GCCTACGGCG ACTCGATCGG GCTGCTGTTC CTCATCGGTG CCGGGCTGGC CCTCGTCGGC
CTGGTGGCGG CGCTCTTCAT GCGCGGCACG CACCTGCGCG ACACGGTCGA CCTCAAGGCG
GCCGTCGCGG AGGCGGCCGA GGAGGACGTC GCCGTCGAGA CGGCCGCGGC GACGGCGCTC
GGCGCTGCGG TCGCGGTGGA CGAGACCGCG GACCAGACTG CGGACGAGAC GGCGGACGCG
GTGGACGACG CCGACGGCGT CACGGCAGGC GCGCGCTCAA CCACGTGA
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| Protein sequence | MTATTASTAP TTDTDSDAEH KQILRVLVGL LLALFVAMLS GTIVANALPV IIAELDGTQQ
QYTWVVTATL LASTAVTPLF GKLADLYDKK KLLLIGIGIF AVGSLLSGLS TSAGMLIGFR
VIQGVGLGAL QALVQITIAT IISPRQRGRY AGYMGAVMAF ATVSGPLLGG LIVDVSWLGW
RWCYWSAIPL ALIAMVVLAR RLHVPPPSRT EVKVDWLGAT LISAAVTLLL LWVSFAGPTH
SYDWISWQTA VMVPGALALF GLFIWVESRV AEPIVPLWIL RERTTTLAIV ASIAVGVGMF
GASVFLGQYF QIARGYSPTE AGLLTIPMML GLLVSSTVSG RFVTQIGRWK PFVVWGLVTF
TAGMGLLGSI QYGTSLWLIG VFMLVAGIGL GASMQNLVLA VQNTVPLSDM GAATSSITFF
RSLGGAMGVQ VLGAVFASHV SSLTATRLTD AGIPVAPGGD GGGSLDLSEL PDAVADIIRS
AYGDSIGLLF LIGAGLALVG LVAALFMRGT HLRDTVDLKA AVAEAAEEDV AVETAAATAL
GAAVAVDETA DQTADETADA VDDADGVTAG ARSTT
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