Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcav_0448 |
Symbol | |
ID | 7860708 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beutenbergia cavernae DSM 12333 |
Kingdom | Bacteria |
Replicon accession | NC_012669 |
Strand | - |
Start bp | 497734 |
End bp | 499320 |
Gene Length | 1587 bp |
Protein Length | 528 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 643864526 |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_002880473 |
Protein GI | 229818947 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.130384 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGACGA CGCAGCCCAC CTCCCGTCGC GACGTCCCCG CGCGCGCCGG CGCCCGCGAG TGGACGGCGC TGGGCGTGCT CGCACTCCCC GCGCTCCTGG TCTCGATCGA CGTGTTCGTG CTGCTGCTCG CCCTGCCGTC CCTGAGCTCC GACCTCGGGG CCACCGCAAC CCAGCAGCTC TGGATCCTCG ACGTCTACGG GTTCATGCTC GCCGGGTTCA TGCTCACCGC CGGCACGCTC GGCGACCGGA TCGGACGCCG TCGCCTGCTG CTCATCGGAG GCGCCGCGTT CGGCGTCGCG TCGATCGTCG CCGCTCTCTC GACCGGCCCG CTCATGCTCA TCGTCGCGCG AGGCGCCCTG GGCATCGCGG GAGCCACGCT CGCGCCGTCG ACCCTCGCCC TCATCAGCAA CCTGTTCCGC GACCCCGCGC AACGCGCGCA GGCGATCGGC GTGTGGCTGG TGTGCTTCAT GGGCGGCGCC GCCCTCGGCC CGGTGGTCGG CGGCATCGTG CTCGAGCACT TCTGGTGGGG CGCGGCGTTC CTGCTGGGCG TGCCGGTGAT GGTGCTGCTG CTGATCCTCG GACCGCTCCT GCTGCCGGAG TACCGCGACG CCACCGCGGG GCGCATCGAT CTCGCGAGCG TCGCCCTGTC GCTCGCCGCG ATCCTCCCGT TCGTCTTCGG GGTCAAGGAG CTCGCGCGCG CCGGATGGGC GCCGCTCCCC GCGCTCGGGC TCACGGCCGG GATCGCGTTC GGCGTGGCGT TCGCCCGCCG CCAGCTGCGC CTGACCGACC CGGTGCTCGA CCTGCGCCTG TTCCGCAACC ACCGGTTCTC GGCCGGCGTC GGCGGCATGC TGCTCATCGC CTCCACCGGC GTGACGATGT ACCTCGTCAC GCAGTACCTC CAGCTCGTGC GGGGCATGGG ACCGCTCGAG GCCGGCATCG CCACGCTCCC CGGAGTCGTG GCGTCGATCA CCGGCTTCCT CGTGTCGCCG CTGCTCGCGC GGCGCGTCCG ACCGGGCGTG CTCATCGCGA GCGGCATGGC CGTGGCGGCG TCCGGCGTCG TCGTGCTCAC GCAGGCGGGA GTCGGCGGCC CGCTGACGTT CGCCGTGCTC GGCTACGCCC TGTTCCAGCT CGGCTGCGGG CCGATGGTCA CGCTCGGCAC CGACCTCGTG GTGGGCTCGG CGCCGCCCGA GAAGGCCGGG TCCGCGGCCG CCGCCTCCGA GTCCAGCGGC GAGCTCGGCT ACGGGCTGGG CATCGCCGTC GTCGGCTCGG TCGCTGCCGC CGTGTACGCC TCACGCCTGT CCGCGTCGAC GACGGCGTCC CTCTCCGCCG CGGACGAGGC GGCGGCACGC GGAAGCCTGG CCGGCGCCGT CGAGGTCGCG CGCACGCTCG GGGACGACGC GCTGCTGGAC GCCGCACGGG AGGCGTTCCT CGCCGGGATG CGGGCCGGGC TCGTCGGCGT CGTCGGCGTG ATGGTGGGCG TCGCCGTCAT CGGGCTCGGA GCGTTGCGCC ACGTTCCTTC GCTACGTCAG GGGCACTCGT CCGGCGCCTC CGCGCCGCAG CCGGCCCCCG CCGGCGAGGA CTCCTGA
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Protein sequence | MTTTQPTSRR DVPARAGARE WTALGVLALP ALLVSIDVFV LLLALPSLSS DLGATATQQL WILDVYGFML AGFMLTAGTL GDRIGRRRLL LIGGAAFGVA SIVAALSTGP LMLIVARGAL GIAGATLAPS TLALISNLFR DPAQRAQAIG VWLVCFMGGA ALGPVVGGIV LEHFWWGAAF LLGVPVMVLL LILGPLLLPE YRDATAGRID LASVALSLAA ILPFVFGVKE LARAGWAPLP ALGLTAGIAF GVAFARRQLR LTDPVLDLRL FRNHRFSAGV GGMLLIASTG VTMYLVTQYL QLVRGMGPLE AGIATLPGVV ASITGFLVSP LLARRVRPGV LIASGMAVAA SGVVVLTQAG VGGPLTFAVL GYALFQLGCG PMVTLGTDLV VGSAPPEKAG SAAAASESSG ELGYGLGIAV VGSVAAAVYA SRLSASTTAS LSAADEAAAR GSLAGAVEVA RTLGDDALLD AAREAFLAGM RAGLVGVVGV MVGVAVIGLG ALRHVPSLRQ GHSSGASAPQ PAPAGEDS
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