Gene Bcav_0392 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_0392 
Symbol 
ID7857992 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp442593 
End bp443636 
Gene Length1044 bp 
Protein Length347 aa 
Translation table11 
GC content72% 
IMG OID643864468 
Productdaunorubicin resistance ABC transporter ATPase subunit 
Protein accessionYP_002880418 
Protein GI229818892 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID[TIGR01188] daunorubicin resistance ABC transporter ATP-binding subunit 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACAC CACTGCTCAG CCGCGCCCGG AGCTCCCGGG CCGACGGCTC CGCCGTCGCC 
GTCCGCACCG AGGGCCTCGT CAAGACCTTC GGCACGAACC GCGCCGTCGA CCACGTGGAC
CTGGAGGTCC ACCGCGGTGA GATCTTCGGC GTCCTCGGCC CCAACGGGGC GGGCAAGACC
ACCACGCTGC GGATGCTCGC CACGCTGCTG GGCATCGACG AGGGGCGCGC CGAGATCTTC
GGCGTCGACG TCAAGCAGCG CCCGCACGTC GTGCGCCAGC TCATCGGCGT CACCGGCCAG
TACGCCTCCG TCGACGAGAA CCTCACCGCC ACCGAGAACC TCTACCTGTT CGGCCGGCTG
CAGGGCATCA GCGGCCCGAA GTCCCGCGCC ACGGCTCAGG ACCTGCTCGA CCGGTTCGGC
CTCGAGGAGG CCGCGAACCG CCCCCTGTCC CAGTTCTCGG GCGGCATGCG GCGGCGGCTC
GACCTGGCCG CGAGCCTCAT CACCCGCCCG CCGCTGATCT TCCTCGACGA GCCGACCACC
GGCCTGGACC CCCGCACGCG CGGCCAGATG TGGACGACGA TCCGGGAGCT CGTCGAGAGC
GGCTGCACGG TGCTGCTCAC CACCCAGTAC CTCGACGAGG CCGACCAGCT GGCCGGCCGG
ATCGCCGTCA TCGACCGCGG CCGCAAGGTC GCCGAGGGCA CACCGGACGA GCTCAAGAGC
CAGGTCGGGT CGTCGACCCT CCAGGTCGTG CTGAGCGACC CCGCCGAGAT CGCGACGGCG
GGCGACGTCG TCAGCCGGGC GATGAGCGCC GAGCCGGTGC TCAGCCCGGA GTCGGGGCGC
ATCCACGTGC CGATGTCGAG CGCCGACGAG GCGGCCGACG TCCTCATCGC GCTGCGCACG
GCCGGCGTCT CCGTCGCCTC GCTCAACGTC AGCAAGCCCA GCCTCGACGA GGTCTTCCTC
GCCCTCACCG GCCACGACAC GGGCGAGGGC GACGACGGCG CCTCCACCGA CACCACGACC
GAACCTCAGG AGAACGTCCG ATGA
 
Protein sequence
MTTPLLSRAR SSRADGSAVA VRTEGLVKTF GTNRAVDHVD LEVHRGEIFG VLGPNGAGKT 
TTLRMLATLL GIDEGRAEIF GVDVKQRPHV VRQLIGVTGQ YASVDENLTA TENLYLFGRL
QGISGPKSRA TAQDLLDRFG LEEAANRPLS QFSGGMRRRL DLAASLITRP PLIFLDEPTT
GLDPRTRGQM WTTIRELVES GCTVLLTTQY LDEADQLAGR IAVIDRGRKV AEGTPDELKS
QVGSSTLQVV LSDPAEIATA GDVVSRAMSA EPVLSPESGR IHVPMSSADE AADVLIALRT
AGVSVASLNV SKPSLDEVFL ALTGHDTGEG DDGASTDTTT EPQENVR