Gene Bcav_0377 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_0377 
Symbol 
ID7859070 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp422133 
End bp423140 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content77% 
IMG OID643864453 
ProductPrephenate dehydratase 
Protein accessionYP_002880403 
Protein GI229818877 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0077] Prephenate dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.461559 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCAGGACG CCGCTGCGGG GTCGATCGCC GGCTCTGGCC GGCCGCGGTA CGCCTACCTC 
GGGCCGCCCG GGACGTTCAC TGAGGCGGCG CTGCACCAGG TGGCGTCGCC GGACACCGCC
GACTTCCTGC CTCGCGGCGA CGTGGTCGCC GCCGTCGACG CCGTCCGGAC CGGTGACGCC
GACTTCGCCG TCGTGCCGAT CGAGAACTCG GTCGAGGGCG GGGTCTCCGC GACGCTCGAC
ACGCTGGCCG CGGGCGGCGG GCTCGTCGTC GTCGGCGAGG CGCTCGTGCC GATCAGCTTC
GTGCTCGCGG CGCTGCCAGG GACGCGACTG TCCGACGTCC GCCGCATCTC CACGCACCCG
CACGCGTGGG CGCAGTGCCG ACGCTCGGTG GCGGCCCTCA CGCCGGGCGC GGTGCACGTG
CCGGCGACCT CCACGGCCGC GGCGGCGGCG CGGCTCGCCG AGGTCGCGGC CGAGCGGGCG
GGCGTGCACG AGGCGGCGGA GGCGCTGGGC TTCGACGCCG TCCTCGTGGC GCCGCACTCG
GCGCGGTCGT ACGGGCTGGA GGTGCTCGCC GCCGACGTCG GGGACAACCC GTCGGCGGTG
ACGCGCTTCG TCGTCGTCGG CCGCCCGGGG CGCATCCCGC CGCGGACCGG CGCCGACAAG
ACCACGCTCA TGGTGCAGCT CCCGGACAAC GAGGCCGGTG CGCTCCTCAC GATGCTCGAG
CAGTTCGCGA CGCGCGGCGT GAACCTGTCG CGGATCGAGT CCCGCCCGAT CGGCGACGAG
CTCGGCCGGT ACGCGTTCTC GATCGACGCC GAGGGGCACC TCGAGGACGA GCGGGTGGCG
GCGACGCTCA TGGGGCTGCA CCGCGTCTGT CCCCTCGTGC TGTTCCTCGG GTCCTACCCG
CGGGCCGACG GCGCGCGCAC CCAGGTGCAC CGCGGGACCT CCGACGCGGA GTTCGCCGCG
GCGCGCGGCT GGGTCGAGGG TCTGCGCGGC GACGGCGCCC CCGCCTGA
 
Protein sequence
MQDAAAGSIA GSGRPRYAYL GPPGTFTEAA LHQVASPDTA DFLPRGDVVA AVDAVRTGDA 
DFAVVPIENS VEGGVSATLD TLAAGGGLVV VGEALVPISF VLAALPGTRL SDVRRISTHP
HAWAQCRRSV AALTPGAVHV PATSTAAAAA RLAEVAAERA GVHEAAEALG FDAVLVAPHS
ARSYGLEVLA ADVGDNPSAV TRFVVVGRPG RIPPRTGADK TTLMVQLPDN EAGALLTMLE
QFATRGVNLS RIESRPIGDE LGRYAFSIDA EGHLEDERVA ATLMGLHRVC PLVLFLGSYP
RADGARTQVH RGTSDAEFAA ARGWVEGLRG DGAPA