Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcav_0321 |
Symbol | |
ID | 7859013 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beutenbergia cavernae DSM 12333 |
Kingdom | Bacteria |
Replicon accession | NC_012669 |
Strand | - |
Start bp | 345888 |
End bp | 346838 |
Gene Length | 951 bp |
Protein Length | 316 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 643864397 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_002880347 |
Protein GI | 229818821 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1175] ABC-type sugar transport systems, permease components |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCCACCC TGACCGCACC CACCTCCGCG CCCGCTCAGG CGCCGTCGTC CGGCTCCCGG ACCAGCCGCG GCACCGGTCC GCGCGCCCGC GTCGGCTGGC TCTTCATCGC ACCGAACCTC ATCGGCGTCG CGCTGTTCAC GTTCATCCCG CTGGTCTCGG TGATCGTGCT GGCGTTCACG GACTGGAACC TCGTCTCGGG GCTCGGCGGC ATCGAGTTCA TCGGCGTCGA CAACTTCGTG AACGTGCTGC GCGACCCCGT CTTCTGGGGC AGCGTCGGCC GGACCATCGT GTACGCCGGT GTCAGCGTGC CGCTCACCGT GCTGCTCGGC ATGGCGCTCG CGATCGCGCT CAACCGCGAC ATCCCTGGCC GCGGCGCGCT GCGGGCCGTG TTCTTCCTGC CGTACATCGT GTCCACGGTC GCGGTCGGCA TGACGTGGCT CATGCTCATG AACCCGTCGG CCGGCCTCGT CAACCAGGTG CTCCACGGCC TGGGCATCGA GAACGCCCCG GCGTGGTTCG CGTCGTCGCG CTGGGCACTG CCCGCCCTCA TCGTCATCGC GATCTGGAGC GGCGTCGGGT ACGCCGCCGT CATCTACCTG TCGGCGCTGC AGGACGCCCC ATCCGACCTG TACGAGGCGG CGGAGATGGA CGGCGCCGGC GCGTGGCTGC GGTTCCGCAC GATCACGTGG CCGGCGCTCA TGCCGACCAC CGTGTTCCTG CTCGTCACGC TGTTCATCGG GACGTCGCAG GGCTTCGGCC TCGTGGCCCT GCTGACGGCG GGCGGCCCGG GTGACGCGAC AACCGTCATG TCCTTCTACA TGTATCAGAC CGGCTTCCAG TTCTACCGGT TCGGGTACGC CGCGGCGATC GGCCTCGTGA CGTTCGTCGG CGTCCTCGCC CTCACGCTCG CGATGTGGCG AGCCCAGCGC GGAAAGGCTC TCCATGACTG A
|
Protein sequence | MATLTAPTSA PAQAPSSGSR TSRGTGPRAR VGWLFIAPNL IGVALFTFIP LVSVIVLAFT DWNLVSGLGG IEFIGVDNFV NVLRDPVFWG SVGRTIVYAG VSVPLTVLLG MALAIALNRD IPGRGALRAV FFLPYIVSTV AVGMTWLMLM NPSAGLVNQV LHGLGIENAP AWFASSRWAL PALIVIAIWS GVGYAAVIYL SALQDAPSDL YEAAEMDGAG AWLRFRTITW PALMPTTVFL LVTLFIGTSQ GFGLVALLTA GGPGDATTVM SFYMYQTGFQ FYRFGYAAAI GLVTFVGVLA LTLAMWRAQR GKALHD
|
| |