Gene Bcav_0312 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_0312 
Symbol 
ID7859004 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp335399 
End bp336295 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content67% 
IMG OID643864388 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_002880338 
Protein GI229818812 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0395] ABC-type sugar transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCGTCC TCGGAAGCCG CGGCGCCGCG CCCGTCGTCC GTCACCCGCT GGGTGACCCC 
CACTCACGAT CCCGGGTCGG ACGACGGCGG TCCGCCGTCA GCTACCTCAT CCTGCTGCTC
GGCTGCCTCG CGTTCCTCTT TCCCCTCGCG TGGCTCGTCA GCACGAGCCT CAAGACGCAG
GACCAGATCC TCGTCTTCCC GATCCAGTGG ATCCCCGACC CCGTCGCCTG GGAGAACTAC
GCGGAGATCT TCCGGGTGGC TCCGTTCGGG CGGTACCTCC TCAACACGGT GATCCTCACC
GCGTTCGGGG TGCTCGGCTC GATCATCGGG GCGTCGATCG CCGGGTACGC GTTCGCCCGG
CTGCGGTTCC GCGGCCGGGA CACGCTGTTC CTCGTGATGC TCGCGACGAT GATGGTGCCG
TCGTGGGCGA CGCTCATCCC GTCGTACGTG CTGTTCGCGC GGATCGGATG GCTCGACACG
TTCCTGCCGA TCATCGTGCC GGCGTTCTTC GCCGCCCCGT TCAACGCGTT CCTGCTGCGG
CAGTTCTTCA TGTCCGTGCC CCTCGAGCTG GAGGAGGCGG CGCGGATCGA CGGCGCCGGG
ACGTTCCGGA CGTTCCGCAC CATCGCCCTG CCGCTGGCGA AGCCCGCGCT GATCATCGTG
GGGCTGTTCT CGTTCCTCCT GTACTGGAAC GACTATCTCG GCCCCCTGGT CTACCTGCAG
AGCGAGCGGA ACTACCCGCT CGCGCTCGGC ATCGCGAACT TCGTCGGGCT GCAGAACCAG
GACTACGCGC TCGCCATGAC GGGCGCCGCC ATCGCCATCG CACCGTGCGT GCTGCTGTTC
TTCTTCGCGC AGCGATGGTT CGTCCAAGGA GTTGTGATCA CCGGAGTGAA GGGATGA
 
Protein sequence
MVVLGSRGAA PVVRHPLGDP HSRSRVGRRR SAVSYLILLL GCLAFLFPLA WLVSTSLKTQ 
DQILVFPIQW IPDPVAWENY AEIFRVAPFG RYLLNTVILT AFGVLGSIIG ASIAGYAFAR
LRFRGRDTLF LVMLATMMVP SWATLIPSYV LFARIGWLDT FLPIIVPAFF AAPFNAFLLR
QFFMSVPLEL EEAARIDGAG TFRTFRTIAL PLAKPALIIV GLFSFLLYWN DYLGPLVYLQ
SERNYPLALG IANFVGLQNQ DYALAMTGAA IAIAPCVLLF FFAQRWFVQG VVITGVKG