| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_0292 |
|---|
| Symbol | pgi |
|---|
| ID | 7858984 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | + |
|---|
| Start bp | 313834 |
|---|
| End bp | 315546 |
|---|
| Gene Length | 1713 bp |
|---|
| Protein Length | 570 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 643864369 |
|---|
| Product | glucose-6-phosphate isomerase |
|---|
| Protein accession | YP_002880319 |
|---|
| Protein GI | 229818793 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0166] Glucose-6-phosphate isomerase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACCTTCG ACGCCGCCGC CCCGATCGAC CCGACGTCCA CACCAGCGTG GGCCGACCTG
CTCGCCCACC ACGACGCGCT CGACGTCGAC CTGCGCGCCT GGTTCGCCGC CGACCCGAAG
CGCGCCGAGC GGATGAGCCA CCGCCTCGCG GACCTGCACG TCGACCTGTC GAAGAACACC
GTCACGCCCG CGACGCTCGA CCTCCTCGTC CAGCTCGCAC GCGAGACGAA CGTGCCGGAG
CGCCTGGCCG CCATGTTCGC CGGCGAGCAC GTCAACACGA CCGAGGACCG CGCCGTCCTG
CACACCGCGT TGCGCCGCCC CGCAGGAGCG GAGCCGCCGC TCGTGGTCGA CGGCCAGCAC
GTCGACGACG ACGTACAGGC TGAGCTGGCC AAGATGTACG CCTTCGCGGA GAAGGTCCGC
AGCGGCACCT GGCGCGGCCT CACGGGCGAG CGCGTCCGCA CCGTCGTCAA CATCGGCATC
GGCGGGTCCG ACCTCGGCCC CGTCATGGCG TACGAGGCGC TCAAGCCGTA CGTGCAGGAG
GGCGTCGAGG TCAGGTTCGT CTCGAACATC GACCCGACCG ACATCGCCCG CGCGACCCGC
GACCTCGACC CGGCCACCAC GCTGTTCGTC GTCGCGTCCA AGACGTTCAC GACGCTCGAG
ACGCTCACGA ACGCGCGTCT CGCACGCGCG TGGCTCTGGG CGCGGCTCGA GGCCGCGGGC
GACGTCGACG ACGCCACGTC CCGTGCCGCG GCGGTCGCCC ACCACTTCGT CGCCGTCTCG
ACGGCGCTCG ACAAGGTCGC CGCGTTCGGC ATCGACCCGG CGAACGCGTT CGGGTTCTGG
GACTGGGTGG GCGGGCGCTA CTCGGTGGAC TCGACGATCG GGACCTCGCT CGCCATCGCG
ATCGGTCCCG ACGCGTTCGC CCAGCTCCTC GCCGGCTTCC ACGCCGTCGA CGAGCACGTG
CGGACCACGC CGATCGAGCG CAACGTGCCG GTCCTCATGG GGTTGCTCAA CGTCTGGTAC
GTCAACGTCG TCGGCGCCCA CACGCACGCC GTCCTGCCGT ACTCGCAGTA CCTGCACCGG
TTCCCCGCGT ACCTGCAGCA GCTCACGATG GAGTCGAACG GCAAGTCGGT GCGCTGGGAC
GGCTCGCCCG TGACGACGCA GACCGGCGAG GTCTTCTGGG GCGAGCCCGG CACGAACGGG
CAGCACGCGT TCTACCAGCT CCTCCACCAG GGCACACGGA TCGTCCCGGC GGACTTCATC
GCGTTCGCGA CGCCGAACGA CCCGCTCCGC GACGGCGCGA ACCACGACGC CGACGTCCAC
TCCCTGCTCC TCGCGAACTT CCTCGCGCAG ACCAAGGCGC TCGCGTTCGG CAAGACCCCG
GACGAGGTCC GCGCCGAGGG GACTCCGGAG CACCTCGTGC CCGCCCGCAC GTTCGCCGGC
AACCGCCCGA CGACGTCGAT CATGGCGCCG CTGCTGACGC CGTCGGTGCT CGGCCAGCTC
ATCGCGCTCT ACGAGCACAT CACGTTCGTG CAGGGCGCCG TGTGGGGCAT CGACAGCTTC
GACCAGTGGG GCGTAGAGCT CGGCAAGACG CTCGCGCTGC AGATCGCGCC CGCGCTGACG
GGCGACGCCG CCGCGCTCGC CGCGCAGGAC CCCTCCACCG CCGCGCTCAT CGCGTACTCC
CGCGCACACC GCGGTCCCGA TCCCGAAGCG TGA
|
|---|
| Protein sequence | MTFDAAAPID PTSTPAWADL LAHHDALDVD LRAWFAADPK RAERMSHRLA DLHVDLSKNT
VTPATLDLLV QLARETNVPE RLAAMFAGEH VNTTEDRAVL HTALRRPAGA EPPLVVDGQH
VDDDVQAELA KMYAFAEKVR SGTWRGLTGE RVRTVVNIGI GGSDLGPVMA YEALKPYVQE
GVEVRFVSNI DPTDIARATR DLDPATTLFV VASKTFTTLE TLTNARLARA WLWARLEAAG
DVDDATSRAA AVAHHFVAVS TALDKVAAFG IDPANAFGFW DWVGGRYSVD STIGTSLAIA
IGPDAFAQLL AGFHAVDEHV RTTPIERNVP VLMGLLNVWY VNVVGAHTHA VLPYSQYLHR
FPAYLQQLTM ESNGKSVRWD GSPVTTQTGE VFWGEPGTNG QHAFYQLLHQ GTRIVPADFI
AFATPNDPLR DGANHDADVH SLLLANFLAQ TKALAFGKTP DEVRAEGTPE HLVPARTFAG
NRPTTSIMAP LLTPSVLGQL IALYEHITFV QGAVWGIDSF DQWGVELGKT LALQIAPALT
GDAAALAAQD PSTAALIAYS RAHRGPDPEA
|
|---|
| |