Gene Bcav_0235 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_0235 
Symbol 
ID7860029 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp256357 
End bp257664 
Gene Length1308 bp 
Protein Length435 aa 
Translation table11 
GC content79% 
IMG OID643864312 
Producthistidine kinase dimerisation and phosphoacceptor region 
Protein accessionYP_002880262 
Protein GI229818736 
COG category[T] Signal transduction mechanisms 
COG ID[COG4585] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCCGACC CCGATCTCGC GAGACCCGCG CCGCCGTCGT CCGGCGGTGA CGGCGGCACC 
GGCGCGCGCG CGAGCGTCGT GGTCCGTGCG GGCGTCTACC TCGTGCTGGG CGGCGTGGTG
GCCGCCGCGT ACGCCGTGCT CGGGGTGGGG CTGTGGCAGC TCGTCGACGC CGCGCCCCAG
GTGCCGCTCC CGATGACCGT GGCGATCGCC GTCGTCGCCG TACCGCTCGG CGCCCTCCCG
CCGTTCCTCG CGCCGATCCG CGAGCTCGAG ACCGCTGCCG CGCGATCGCT GCTGGGGGCC
GGCGTCGACG ACGTCCCCGC GCCGCCGGGA GGGCAGCTGC GCCCGGACGA CCGTGCCCGC
GCCGCGGCGT TCTTCGGCGC GCACCTCATC CTCGGCGGCG CGATCCTCGT CGGCCTGCTC
GCCGGCCTGC CGACGGCGGT CGGGCTGCTC GGCGCCGCGC TCGGCGTCCC GTCCGACGGG
ATCCAGCTCG TGCCGGGCGA GAGCACGGCA GCGGCGCTCG GCCCGTGGGC GATCCCGGTG
GCCCTCGCCA TCCTCGTCGC CCTGCCCCTG GGGACGGCGC TCGCGGGCTC GATCATGCGT
GCTCTCGCTC CGCCGTTGCT CGGTCCGGGG CCGGAGCAAC GGGCGGCGGC GGAACGCGCG
CGCATCGCCG CGCTCGCGGA GCGGAACCGG CTCGCGCGCG AGCTGCACGA CAGCGTCGGG
CACGCGCTCA CCGTGACCAC GCTGCAGGCG ACGGCCGCCG AGCGCCTGCT CTCGCGCGAC
CCGGACGCCG TCCGCGAGGC GCTCCGCGCG ATCCAGGACA CGGGCCGGTC CGCCCTCGCG
GACCTCGACC ACGCGCTCGG CCTCCTGCGC TCCGACGACG CCGCCGCGCG GCCCGCCCGG
GCGCCGGACC GCACGCTCGA CGACCTGCCC CGGCTCGTCG CGGAGTCCGC CGCCGCCGGC
CACACGCTGG GCGTCGACGG CGACGTCCCG CCCGGCCTGC CGGGCGTCGT CTCGCGCGAG
GCGTACGCGA TCGTCGCCGA GGCGGCCGTC AACGCGTGGC GGCACGGGTC CGGGCCGGCC
CGCGTGCGCC TCGACGCCAG CGACAGCGTC CTCGGCCTCG AGATCGCGAA CCCCGTGCCG
ACGACGTCGG GTGCCGGGCG TGCGGACCGG GCCGGGCGCG GCGTCGTCGG CATGCGGGAA
CGCGCGCACG TCGTCGGCGG CACGCTCGAG GCCGGCGCGT CGGACGCGCC CGACGGCGCG
ACCTGGGTCG TGCGCGCGAG ACTTCCGTGG AGGAGAGCCG ATGACTGA
 
Protein sequence
MPDPDLARPA PPSSGGDGGT GARASVVVRA GVYLVLGGVV AAAYAVLGVG LWQLVDAAPQ 
VPLPMTVAIA VVAVPLGALP PFLAPIRELE TAAARSLLGA GVDDVPAPPG GQLRPDDRAR
AAAFFGAHLI LGGAILVGLL AGLPTAVGLL GAALGVPSDG IQLVPGESTA AALGPWAIPV
ALAILVALPL GTALAGSIMR ALAPPLLGPG PEQRAAAERA RIAALAERNR LARELHDSVG
HALTVTTLQA TAAERLLSRD PDAVREALRA IQDTGRSALA DLDHALGLLR SDDAAARPAR
APDRTLDDLP RLVAESAAAG HTLGVDGDVP PGLPGVVSRE AYAIVAEAAV NAWRHGSGPA
RVRLDASDSV LGLEIANPVP TTSGAGRADR AGRGVVGMRE RAHVVGGTLE AGASDAPDGA
TWVVRARLPW RRADD