Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcav_0223 |
Symbol | |
ID | 7860017 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beutenbergia cavernae DSM 12333 |
Kingdom | Bacteria |
Replicon accession | NC_012669 |
Strand | - |
Start bp | 238718 |
End bp | 239422 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 643864300 |
Product | regulatory protein TetR |
Protein accession | YP_002880250 |
Protein GI | 229818724 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.029073 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGTCCGATC AGCCCACGCG CAACGAGGCC GGCCGCCGCG CTCGCGAGCG GCTCGTCGAC GCCGCCGAGC GCCTCGTCGC CACCCGTGGC CCCGAGGTGC CGGTCAGACA GATCACCCGG GCCGCCGGCC AGCGCAACAA CTCCGCCGTG ACGTACCACT TCGGCTCGCG CGCCGGTCTC CTGGACGCCG TGTGGACCCG GAGAACCCAG CGCGTCAACG CCGACCGGTC CGCGATGATG GACGAGCTCG CCGCCGACGG CCGCGACGCC GACCTCCACG CGCTGGTCGA GGCCCACGTC CTGCCGATGG CGCGAGAGAT CGGCGCCGGG CTCCCCAGCT ACTGGGCGCG CTTCAACGAG GTCACGCTCG CCGCGATGCC GCTCGCGTTC CTCGACACGT TCGACGCCGA TCTCGCGCAG CGCGTCGAGA CGGAGGTGCC GCTGCGCACG CTGAGCGACC TGTTCCATCG CATGCGCAAG CACGTCGCCG ACGGTGCCGA ACCGGCCGCC GGCCTGCAGG TCGCGCTCAT GGTGCGGTTC GTGATCGCCG CGCTCGCGAG CTGGGAGCGG GACCAGGAGG CCGGCCGGGT CGACGCCGCG TCGCTCGAGG AGTTCGCGCA CGGGCTCGTC GAGCTCGGGC ACGAGATGCT CGTCCACCCG AACCGGCACC TCGCGGACGC CGTGGCGCAC GTCGGCCGCG CGTAG
|
Protein sequence | MSDQPTRNEA GRRARERLVD AAERLVATRG PEVPVRQITR AAGQRNNSAV TYHFGSRAGL LDAVWTRRTQ RVNADRSAMM DELAADGRDA DLHALVEAHV LPMAREIGAG LPSYWARFNE VTLAAMPLAF LDTFDADLAQ RVETEVPLRT LSDLFHRMRK HVADGAEPAA GLQVALMVRF VIAALASWER DQEAGRVDAA SLEEFAHGLV ELGHEMLVHP NRHLADAVAH VGRA
|
| |