Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcav_0220 |
Symbol | |
ID | 7860014 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beutenbergia cavernae DSM 12333 |
Kingdom | Bacteria |
Replicon accession | NC_012669 |
Strand | - |
Start bp | 235000 |
End bp | 236655 |
Gene Length | 1656 bp |
Protein Length | 551 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 643864297 |
Product | TAP domain protein |
Protein accession | YP_002880247 |
Protein GI | 229818721 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.000712779 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCCCCGGC GACCCGACCG ACGCCCTGTC CGCCTGACCG CCGCCGTCGC AGCCGCCGCG CTGCTCGTGG TGGGCGCTCC CGTCACGGCG AACGCTGATC CGCCCCACGC CGGCGCCGAG CCCGCCCGAC AGGTCGAGGC ACGGGTCCCG GACCTCTCCT GGGAGGCGTG CGGCGAGGGC CTCGAGGCGT TCGAGTGCGC GAGCGCCGAG GTCCCCATCG ACTACGACCG TCCGCGGGGC GACACGACGA CGATCGCGCT CACGCGCCTC CCCGCCACAG ACCCCGCGCA GCGCATCGGC AGCCTGTTCC TCAACTTCGG CGGCCCCGGC GGGCCGGGCG TCGCGACGTT GCACCAGATC GGCGACGCCT TCCTCGACCC GTCGGTGCGC GAACGGTTCG ACATCGTGGC CTTCGACCCG CGTGGCGTCG GACTCTCCGA CCCGGTGACG TGCTTCCCCG ACGCCGAGAC GGAGGCCGAG TTCCTCGCCG ACGGCGACGC GTTCCCGACC GACCGCCGCG AGGAGGCGCG GTTCCAGGCG CTGTTCGCGA CGCTGTCGGC CTCGTGCGCG CTGCTGTCCG GCGACCGCAT CGCGCACGCG TCGACGGCGA ACGTGGCCCG CGACATGGAC CTGCTGCGGC AGGCCGTCGG CGACGAGCAG CTCTCCTACC TCGGCTACTC CTACGGCACC GTGCTCGGGG CGACCTACGG CGCCCTCTTC CCGGACCGGG TGCGGGCGCT CGCGCTGGAC GGGACGCTCG ACCCGGAGGC GTGGTCCGGC GGCGAGGGAT CGATCGGGCT GCGCACCGGG CAGGGCGTCG CGGCGAGCGA GACGTTCGAC GAGTTCCTGC GCCTGTGCGC CGAGGCGGGC CCCGAGGGGT GCGCGCTGGC CGCACTCGGC GACCCCCGGC AGGTGGTCGA GGACCTCTTC GCGCAGCTGG ACGCGTCACC CGTACCGGTC CCGATGCCCG ACGGCACGGT CGTCGAGTTC GGGTACGACG ACGCCGTGGC CCTCGCCTTC AGCTCGCTGT ACTCGCCCGT GGCGTGGGCC GACCTCGCCG CCGCCCTCGC CGCGCTGGCC GCGCCGCAGA CGCTCTCGGC ACACGGACCT CCCTCGATCG GCGAGCTGCT CCGCGAGCTC GGCCTCATCG AGGACTACCC GTCGATCGGC GGCGCCCTCG CGAGCATGTG CGTCGACGGC GAGCACCCGC TCGACCCGTG GGACTACGCC GCCCAGGCCG ACGCCGCCGA CGCCGAGGCG CCGCACTTCG GGCGGTTCCG CTCCTGGGTC GGGCTGCAGT GCGAGCACGT GCCGTTCACC GACGCCGACG CCTACACCGG GCCCTGGGAC CAGGGCACCG ACGCGCCGGT GCTCGTCATC GGCACCCGCT ACGACCCCGC GACGCCGTAC GCGTTCACGC AGCCGTACGC GGACCGCTGG AACGACGCCA GCGTGCTGAC GGTCGAGGGG TACGGCCACA CCACCCTGGG CCTCAGCTCC TGCGCGACGG CGGCGATCGC GGCGTACCTG GTCGACCTCG AGGCCACGGA CGGGGCGACC TGCGCCCAGG ACGTCGCACC GTTCCAGGCA GCGGCTCCGC AGTCCGACGA CGACGTCGCC AGGCCGTCGT GGTGGGGCCA CCCCGCAGGG GTCTGA
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Protein sequence | MPRRPDRRPV RLTAAVAAAA LLVVGAPVTA NADPPHAGAE PARQVEARVP DLSWEACGEG LEAFECASAE VPIDYDRPRG DTTTIALTRL PATDPAQRIG SLFLNFGGPG GPGVATLHQI GDAFLDPSVR ERFDIVAFDP RGVGLSDPVT CFPDAETEAE FLADGDAFPT DRREEARFQA LFATLSASCA LLSGDRIAHA STANVARDMD LLRQAVGDEQ LSYLGYSYGT VLGATYGALF PDRVRALALD GTLDPEAWSG GEGSIGLRTG QGVAASETFD EFLRLCAEAG PEGCALAALG DPRQVVEDLF AQLDASPVPV PMPDGTVVEF GYDDAVALAF SSLYSPVAWA DLAAALAALA APQTLSAHGP PSIGELLREL GLIEDYPSIG GALASMCVDG EHPLDPWDYA AQADAADAEA PHFGRFRSWV GLQCEHVPFT DADAYTGPWD QGTDAPVLVI GTRYDPATPY AFTQPYADRW NDASVLTVEG YGHTTLGLSS CATAAIAAYL VDLEATDGAT CAQDVAPFQA AAPQSDDDVA RPSWWGHPAG V
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