Gene Bcav_0220 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_0220 
Symbol 
ID7860014 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp235000 
End bp236655 
Gene Length1656 bp 
Protein Length551 aa 
Translation table11 
GC content75% 
IMG OID643864297 
ProductTAP domain protein 
Protein accessionYP_002880247 
Protein GI229818721 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000712779 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCCCGGC GACCCGACCG ACGCCCTGTC CGCCTGACCG CCGCCGTCGC AGCCGCCGCG 
CTGCTCGTGG TGGGCGCTCC CGTCACGGCG AACGCTGATC CGCCCCACGC CGGCGCCGAG
CCCGCCCGAC AGGTCGAGGC ACGGGTCCCG GACCTCTCCT GGGAGGCGTG CGGCGAGGGC
CTCGAGGCGT TCGAGTGCGC GAGCGCCGAG GTCCCCATCG ACTACGACCG TCCGCGGGGC
GACACGACGA CGATCGCGCT CACGCGCCTC CCCGCCACAG ACCCCGCGCA GCGCATCGGC
AGCCTGTTCC TCAACTTCGG CGGCCCCGGC GGGCCGGGCG TCGCGACGTT GCACCAGATC
GGCGACGCCT TCCTCGACCC GTCGGTGCGC GAACGGTTCG ACATCGTGGC CTTCGACCCG
CGTGGCGTCG GACTCTCCGA CCCGGTGACG TGCTTCCCCG ACGCCGAGAC GGAGGCCGAG
TTCCTCGCCG ACGGCGACGC GTTCCCGACC GACCGCCGCG AGGAGGCGCG GTTCCAGGCG
CTGTTCGCGA CGCTGTCGGC CTCGTGCGCG CTGCTGTCCG GCGACCGCAT CGCGCACGCG
TCGACGGCGA ACGTGGCCCG CGACATGGAC CTGCTGCGGC AGGCCGTCGG CGACGAGCAG
CTCTCCTACC TCGGCTACTC CTACGGCACC GTGCTCGGGG CGACCTACGG CGCCCTCTTC
CCGGACCGGG TGCGGGCGCT CGCGCTGGAC GGGACGCTCG ACCCGGAGGC GTGGTCCGGC
GGCGAGGGAT CGATCGGGCT GCGCACCGGG CAGGGCGTCG CGGCGAGCGA GACGTTCGAC
GAGTTCCTGC GCCTGTGCGC CGAGGCGGGC CCCGAGGGGT GCGCGCTGGC CGCACTCGGC
GACCCCCGGC AGGTGGTCGA GGACCTCTTC GCGCAGCTGG ACGCGTCACC CGTACCGGTC
CCGATGCCCG ACGGCACGGT CGTCGAGTTC GGGTACGACG ACGCCGTGGC CCTCGCCTTC
AGCTCGCTGT ACTCGCCCGT GGCGTGGGCC GACCTCGCCG CCGCCCTCGC CGCGCTGGCC
GCGCCGCAGA CGCTCTCGGC ACACGGACCT CCCTCGATCG GCGAGCTGCT CCGCGAGCTC
GGCCTCATCG AGGACTACCC GTCGATCGGC GGCGCCCTCG CGAGCATGTG CGTCGACGGC
GAGCACCCGC TCGACCCGTG GGACTACGCC GCCCAGGCCG ACGCCGCCGA CGCCGAGGCG
CCGCACTTCG GGCGGTTCCG CTCCTGGGTC GGGCTGCAGT GCGAGCACGT GCCGTTCACC
GACGCCGACG CCTACACCGG GCCCTGGGAC CAGGGCACCG ACGCGCCGGT GCTCGTCATC
GGCACCCGCT ACGACCCCGC GACGCCGTAC GCGTTCACGC AGCCGTACGC GGACCGCTGG
AACGACGCCA GCGTGCTGAC GGTCGAGGGG TACGGCCACA CCACCCTGGG CCTCAGCTCC
TGCGCGACGG CGGCGATCGC GGCGTACCTG GTCGACCTCG AGGCCACGGA CGGGGCGACC
TGCGCCCAGG ACGTCGCACC GTTCCAGGCA GCGGCTCCGC AGTCCGACGA CGACGTCGCC
AGGCCGTCGT GGTGGGGCCA CCCCGCAGGG GTCTGA
 
Protein sequence
MPRRPDRRPV RLTAAVAAAA LLVVGAPVTA NADPPHAGAE PARQVEARVP DLSWEACGEG 
LEAFECASAE VPIDYDRPRG DTTTIALTRL PATDPAQRIG SLFLNFGGPG GPGVATLHQI
GDAFLDPSVR ERFDIVAFDP RGVGLSDPVT CFPDAETEAE FLADGDAFPT DRREEARFQA
LFATLSASCA LLSGDRIAHA STANVARDMD LLRQAVGDEQ LSYLGYSYGT VLGATYGALF
PDRVRALALD GTLDPEAWSG GEGSIGLRTG QGVAASETFD EFLRLCAEAG PEGCALAALG
DPRQVVEDLF AQLDASPVPV PMPDGTVVEF GYDDAVALAF SSLYSPVAWA DLAAALAALA
APQTLSAHGP PSIGELLREL GLIEDYPSIG GALASMCVDG EHPLDPWDYA AQADAADAEA
PHFGRFRSWV GLQCEHVPFT DADAYTGPWD QGTDAPVLVI GTRYDPATPY AFTQPYADRW
NDASVLTVEG YGHTTLGLSS CATAAIAAYL VDLEATDGAT CAQDVAPFQA AAPQSDDDVA
RPSWWGHPAG V