| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_0127 |
|---|
| Symbol | |
|---|
| ID | 7859292 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | + |
|---|
| Start bp | 132429 |
|---|
| End bp | 133757 |
|---|
| Gene Length | 1329 bp |
|---|
| Protein Length | 442 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 643864204 |
|---|
| Product | extracellular solute-binding protein family 1 |
|---|
| Protein accession | YP_002880154 |
|---|
| Protein GI | 229818628 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 42 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGGTTCA CGACGAGAGG CGCGCTGGCC GTGGGTGCCG TGCTGGCGCT CGGGCTCGCC
GCCTGCAGCT CCGGTGACCC GGACGCGGGG GAGGGCGGGC AGACCCAGAT CGTGATCTGG
GATGCCGGAC TGCTGACGAA GAGCACCGAG GACGGCGAGA TCATCGAGGA GTCGTCGTTC
CTCACCCAGG CGGTCGCGAT GTACGAGGAG GAGCACCCCG ACATCGACAT CGAAGTGGTG
CAGACCACCG GTGACATCAG CGCGACCGCT GCACAGTTCC AGGCCGCCTC GATCGCGGGC
GACGGACCGG ACATCCGCAC GTCGTTCACG GGCGGCAACA CGATCTCGTT CGCGGAGTTC
CTGCTCGACC TTGACGGGAC CTTCGACGAC GCGACCGTCG ACGACCTCAG CGGATGGAAC
ACGGTCCGCG AGGGCTATGC CGAGGACGGC GCTCTGCTCG GCATGCCCTA CGGCGGCGGA
TCGTACTTCT ACGTCTTCTA CAACAAGGAG CTCGCCGAGC AGGCTGGGCT CGACCTCAGC
GAACCGCCGG CGACCTGGGA GGACCTGCTC GACGTCGGTC AGCAGGTCCA GGACTCCGGC
GTCGAGGCCG CCCCCTTCTG GATCGCCAAC CTCGAAGGCT ACGTCGGTGC CTGGGTGATC
GCCGCGCTCG TGGGTGGCGA GCTCGGGTCC GACGCCTTCA CGCAGATGTA CAACCAGGAG
ATCGCGGTCG ACGACGACGC CATGGTGCGC GCGTACGAGG CGTACGCCGA GCTGTACTCC
CGAGGGCTCA CGAACCCCGA CGCGGGCAGC GTCTCGAACG GCGACGCGAG CCTCGGCTTC
GTGCAGGGCG ACGGGGTGTT CTACATCAGC GGCGGTTGGG AGAACGCGAG CCTGACCGAG
GCGATGGGCG ACAACATCGG CGTGTTCCCG ATCCCGGTCC TCGAAGGTGC CGAGTACCCG
AACACGGCCG CGGGCGGCCC GAACATCGCG ATCTCGATCA CGAACTACTC GGAGGTCCAG
GAGGAGGCGA AGGACTTCCT GCGCTTCCTG GCGGAGCCGG AGATGATCGA CCTGTACGTC
GAGCTCTTCC AGGTCGAGGC GTCCAACAGC GCGAGCGCGG ACCCGTCGGT CATCACCAAC
CCGCTCCTCC AGACCCAGGC CGAGATGCTG GTCGACGCGG ACGCGGTCGT CTTCCCGTTC
GACAACGTCA TGCCGCAGGG ACTCATCGAT CTCTTCTACC GCGTCAACGC GACGACGTTC
CTCGGCACGA CGACGCCGGA GGACGCCGTC GGCCAGCTCC AGGATCTCGC GAGCACGGAG
CTCGGCTGA
|
|---|
| Protein sequence | MRFTTRGALA VGAVLALGLA ACSSGDPDAG EGGQTQIVIW DAGLLTKSTE DGEIIEESSF
LTQAVAMYEE EHPDIDIEVV QTTGDISATA AQFQAASIAG DGPDIRTSFT GGNTISFAEF
LLDLDGTFDD ATVDDLSGWN TVREGYAEDG ALLGMPYGGG SYFYVFYNKE LAEQAGLDLS
EPPATWEDLL DVGQQVQDSG VEAAPFWIAN LEGYVGAWVI AALVGGELGS DAFTQMYNQE
IAVDDDAMVR AYEAYAELYS RGLTNPDAGS VSNGDASLGF VQGDGVFYIS GGWENASLTE
AMGDNIGVFP IPVLEGAEYP NTAAGGPNIA ISITNYSEVQ EEAKDFLRFL AEPEMIDLYV
ELFQVEASNS ASADPSVITN PLLQTQAEML VDADAVVFPF DNVMPQGLID LFYRVNATTF
LGTTTPEDAV GQLQDLASTE LG
|
|---|
| |