Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcav_0122 |
Symbol | |
ID | 7859287 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beutenbergia cavernae DSM 12333 |
Kingdom | Bacteria |
Replicon accession | NC_012669 |
Strand | - |
Start bp | 127916 |
End bp | 128590 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 643864199 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_002880149 |
Protein GI | 229818623 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGGACAG CACTGGTGAC CGGCGGTGCA TCGGGCCTGG GGAGCGCCTG CGCCGAGCGG CTGACGGACG ACGGGCTGCG CGTCGTCACC GTCGACGTCG CGGCGGGCGC GGACCACGTG CTCGACGTCT CCGACAGCGA CGCCGTCCGT GACCTCGCCG CTCGCCTCGG GCCGGTCGAC GTCCTGGTCA ACAGCGCCGG CATCATCGGC GCCAACGTCC CGCTCGTGGA CGTGGCCGAC GAGGACTGGC AGCGGGTCTT CGCCGTCAAC GTCTTCGGCA CGTTCGCCCT GTGCCGCGCG TTCGCGCCGG GGATGGTCGA GCGCGGCTGG GGTCGCATCG TCAACGTCGC CAGCATGGCC GGCAAGGACG GCAACCCGAA CCTCAGCGCC TACTCGGCGT CGAAGGCCGC CGTGATCGGT CTGACCAAGT CGCTCGGCAA GGAGCTCGCC ACCACCGGCG TGCTCGTGAA CGCCGTCGCC CCGGCCGTCA TCGACACTCC GATGAACGCG GCCACGGAGC CCGAGGTGCT CGAGCACCTG CGCAGCCTCA TCCCGATGCG CCGGCTCGGG AGGCCCGAGG AGTTCGCGGC CCTCGTGTCG TTCCTCGCCT CCGACGCCGT CAGCTTCTCC ACCGGCGCCG TGTACGACCT CAGCGGCGGC CGCGCCACGT ACTGA
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Protein sequence | MRTALVTGGA SGLGSACAER LTDDGLRVVT VDVAAGADHV LDVSDSDAVR DLAARLGPVD VLVNSAGIIG ANVPLVDVAD EDWQRVFAVN VFGTFALCRA FAPGMVERGW GRIVNVASMA GKDGNPNLSA YSASKAAVIG LTKSLGKELA TTGVLVNAVA PAVIDTPMNA ATEPEVLEHL RSLIPMRRLG RPEEFAALVS FLASDAVSFS TGAVYDLSGG RATY
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