| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_0118 |
|---|
| Symbol | |
|---|
| ID | 7859283 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | + |
|---|
| Start bp | 124632 |
|---|
| End bp | 125489 |
|---|
| Gene Length | 858 bp |
|---|
| Protein Length | 285 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | 643864195 |
|---|
| Product | transcriptional regulator, AraC family |
|---|
| Protein accession | YP_002880145 |
|---|
| Protein GI | 229818619 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.809265 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCCGGCGG ACGGGCGCGG CGCCCTCGTC CACCCGCATC AGCTGCAGCG CGTGCTGCAC
CGCGCCGTCC TCCCCGTGAT CGATCCTCGG CTCGCGCCCT ACGTCGAGCA CTTCTGGTCG
GTGGCGTGGC AGCGGCACGG CGAGGCGCCC GCCACGAGCG AGGTCATCAC GCGCCCCGTC
TGCCACCTCA CGTTCGAGAA CGGCGTGGCC GACGACGGCG GCCCGCTCGT GCGGCACGGC
GTCACCATGC CCGCGGCGGT CGTCACGACC GTCTGGACCA GACGCTTCGT GGTGGACCTC
GACGGCGAGG GGCGGGCGTT CGGCGTCGGG TTTCGCCCCG GCGGGCTCGC GGCGCTGGCG
GGCCGCGAGC TGCTCGCCGA CCTGACGCTG CCCGCGGACG ACGTGTTGCC GGGTGCGGCC
GCGCTCCTGC CGCGCGTGCT CGCCGAGGAC GACGACGCGG CGCGTCACGC CGTCGTCGAG
GGCTGGCTGG TGGGCCTCGC GGCGGAGCCC GACCCGGCGT ACCTGGACGC GGTCGCGCTC
ATCGAGAGGG TGTGGACCGA CAGCTCGATC GTCCGGGTCG AGCAGATCGG CGAGGTCGCG
GGCCTGTCCG CGCGGAGCGT GCAGCGGATG TTCCGCCGGT ACGTCGGGGT GGGCCCGAAG
TGGGTGCTCG TGCGGGCGCG TCTCCGGGAC GCCGCCGCGC GGCTGGACGG CGAGGGCGAG
GCGTCCGTGT CGCTCGCGGA CCTCGCCGCC GAGCTCGGCT GGGCCGATCA GTCGCATCTC
GTGCGTGACT TCCGCCGGCA GCTCGGGACC ACGCCGGGGC GGTACGCGCG CGATGCGCGG
GCCGCGCCGA CCACCTGA
|
|---|
| Protein sequence | MPADGRGALV HPHQLQRVLH RAVLPVIDPR LAPYVEHFWS VAWQRHGEAP ATSEVITRPV
CHLTFENGVA DDGGPLVRHG VTMPAAVVTT VWTRRFVVDL DGEGRAFGVG FRPGGLAALA
GRELLADLTL PADDVLPGAA ALLPRVLAED DDAARHAVVE GWLVGLAAEP DPAYLDAVAL
IERVWTDSSI VRVEQIGEVA GLSARSVQRM FRRYVGVGPK WVLVRARLRD AAARLDGEGE
ASVSLADLAA ELGWADQSHL VRDFRRQLGT TPGRYARDAR AAPTT
|
|---|
| |