Gene Bcav_0098 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_0098 
Symbol 
ID7859263 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp104823 
End bp105629 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content65% 
IMG OID643864175 
Producthypothetical protein 
Protein accessionYP_002880125 
Protein GI229818599 
COG category 
COG ID 
TIGRFAM ID[TIGR01453] group I intron endonuclease 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.243241 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGACG AACTCGTCGC GCGATTGACT CTCGTCGGAT CCGTCTACGG CATTCGACGC 
GTTGACTCGC TCGAGTATCG CTACGTGGGG ATCACGACCA AGCCGATCGA CGTCAGGCTG
GCGCAACACG TCAAGAACGC ACGCCTTGGC ACAAAGACAC CCCTGTGCGA CTGGTTGCGC
AAGCACGGTT CCGACGCGAT CGTGGTCGAC CTCCTCGACC AGGTCTACAC CGGTCCCGAG
GATCTCGGTG ACCTCGAGAT CGGCTGGATC AGGCAGCTCC GCGAAGGTGG GCACCGCTTG
CTCAACGTGT CCGAGGGTGG TCTCGGACCG ACCGGAGTCG TGTGGACGCA GGAGCAGCGC
GAAGCTGCGA GGCTGCGTTC GACCGGCCGC AAGGGTGTCA GCCGACCTGG GGAGCTGAAT
CCATTCCACG GCCGCCACCA CTCGCCGGAG CAACGCGAAC AGTGGGCTCG GCAGCGCAAG
GGAACCAACG CCGGCCCGGC GAACCCGAAC TTCGGCAAGT TCGGCCCGGA TCACCCCAGC
TTCGGCCACG TGATGTCGCT CGAGTCGCGG GAGGCGCTTT CGAAAGCGCG GCGGGGCGAG
GGGAACCCGA ACTTCGGGAA GGTCACGAGC CCGGAGACCC GGGCGAAGCA GTCGGCCGCC
ACCAAGGGAA TTCCGCGTCC GAAGAGCGCA CGAAGCGCGC ACACGAGATA TCACACGAAC
AAGGGCCGTA CCAGCACGGC CTGCAAGTAC TGCGTCGAGG ATGGAGCCGC CTCCTCGGGC
ACGTCCGAAG GAACGATGCT CCCATGA
 
Protein sequence
MIDELVARLT LVGSVYGIRR VDSLEYRYVG ITTKPIDVRL AQHVKNARLG TKTPLCDWLR 
KHGSDAIVVD LLDQVYTGPE DLGDLEIGWI RQLREGGHRL LNVSEGGLGP TGVVWTQEQR
EAARLRSTGR KGVSRPGELN PFHGRHHSPE QREQWARQRK GTNAGPANPN FGKFGPDHPS
FGHVMSLESR EALSKARRGE GNPNFGKVTS PETRAKQSAA TKGIPRPKSA RSAHTRYHTN
KGRTSTACKY CVEDGAASSG TSEGTMLP