Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcav_0093 |
Symbol | |
ID | 7859258 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beutenbergia cavernae DSM 12333 |
Kingdom | Bacteria |
Replicon accession | NC_012669 |
Strand | + |
Start bp | 100822 |
End bp | 101265 |
Gene Length | 444 bp |
Protein Length | 147 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 643864170 |
Product | Endoribonuclease L-PSP |
Protein accession | YP_002880120 |
Protein GI | 229818594 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0251] Putative translation initiation inhibitor, yjgF family |
TIGRFAM ID | [TIGR00004] endoribonuclease L-PSP, putative |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.248821 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCGAGC AGACCAGCAC CGCAGCCGAC GCCGCACCGT CGAGCGGCGC GAAGGTGGCG ATCCTGACGT CGGACGCCCC GCCCCCCGCG CACACGTTCT CGCAGGGTGT GCGCAAGGGC CCGATCCTGC AGGTGTCCGG GCAGGGGCCG GTGGACGCGG CCACCGGCGC GTACCGGCAC CCCGGCGACG TCGCGGCGCA GACGACGCTC ACGCTGCGCA ACGTGAAGGC GATCGTCGAG GCCGGGGGCG CCTCGTTCGC CGACGTCGTC ATGCTGCGCG TGTACCTGCG TCACGAGGGT GACTTCGCGT CGATGAACGA GGCCTACGGC GCGTTCGTCG CGGAGCACGC GGGGGAGGTC CTCCCGTCCC GGACGACCGT GTTCACCGGC CTGCCTCGGC CGGAGATGCT GGTGGAGATC GACGCGCTCG CCGTCGTCGA CTGA
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Protein sequence | MSEQTSTAAD AAPSSGAKVA ILTSDAPPPA HTFSQGVRKG PILQVSGQGP VDAATGAYRH PGDVAAQTTL TLRNVKAIVE AGGASFADVV MLRVYLRHEG DFASMNEAYG AFVAEHAGEV LPSRTTVFTG LPRPEMLVEI DALAVVD
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