| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_0084 |
|---|
| Symbol | |
|---|
| ID | 7859249 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | + |
|---|
| Start bp | 92007 |
|---|
| End bp | 93005 |
|---|
| Gene Length | 999 bp |
|---|
| Protein Length | 332 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 80% |
|---|
| IMG OID | 643864161 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002880111 |
|---|
| Protein GI | 229818585 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0122] 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCCACGC TCCCGATCGT CGACGACGGC GTCCCGCAGG ACCTGGGATC CCCGCGCGAG
CGCGGCGCGG CTCCCGCCGC CTCGACGACG TACGACCCCC GCGGCCCGCT CGACCTCGGC
GCGACGCTCG CCCCGCTGCG CCACGGCCCG TACGACCCGA CGGTGGCCCT CGGTCCGCGC
GGCGGCTGGG TCGCGCTGCG CACACCCCAC GGAACAGCCA CGCTGCGGAT CGAGGCGCGC
GACGCCGTCG TCCACGCCGA CGCATGGGGC GCCGGCGCCG AGTGGGCGGT CGCCTCCGTG
CCCGAGCTGT GCGGGGCCGG CGACGACGTC TCCGACTTCG ACGCCGCCGC GCACCCCGCC
GTCCGCGAGG CACGACGGCG GCAGCCCGGA CTGCGCCTCA CCCGCACGTC CCGCGTGCTC
GATGCGCTCG CCCCGGCCGT GCTCGAGCAG CTCATCCACA GCTCCGAGGC GCACCGCGCC
TGGCGGACGC TCGTCCGGAA GCACGGTGTG CCAGCGCCCG GCAGCGGTCC GGACGGTCCG
GCGCCCGGCG GGCTCATGGT GGCGCCCGAC GCCGACGGCT GGCGCAGGGT GCCCGTCTGG
GACTGGCGTC GGGCCGGCAT CAGCGAGACG CGCGGAGCGA TGATCGCCCG GGCGGCCGCC
GTCGCGCCGG CGCTGGAGCG CACCCTGGCG CTCGGCCGCG GCGGGCCGGA GGCGTCGCGC
CGCCTGCGCT CCCTCCCGGG CGTCGGCGCC TGGACGGCCG CCGAGACCCT GCAGCGCGCT
CACGGCGATC CGGACGCGCC GAGCTTCGGC GACCTCCACG TGCCGGCCGC GGTCGGCTGG
GCTCTGACGG GTTCCGCCGT CGACGACGCC GGCATGGCCG AGCTCCTCGT GCCGTGGGCG
GGACACCGGC AGCGCGTGGT CCGCCTGCTC CTGCGCGCGT ACGGGTTCCC GCCCCGGCGC
GCGCCCCGGG CGGCGGTCCC GCGCCACCGC CGCTGGTAG
|
|---|
| Protein sequence | MATLPIVDDG VPQDLGSPRE RGAAPAASTT YDPRGPLDLG ATLAPLRHGP YDPTVALGPR
GGWVALRTPH GTATLRIEAR DAVVHADAWG AGAEWAVASV PELCGAGDDV SDFDAAAHPA
VREARRRQPG LRLTRTSRVL DALAPAVLEQ LIHSSEAHRA WRTLVRKHGV PAPGSGPDGP
APGGLMVAPD ADGWRRVPVW DWRRAGISET RGAMIARAAA VAPALERTLA LGRGGPEASR
RLRSLPGVGA WTAAETLQRA HGDPDAPSFG DLHVPAAVGW ALTGSAVDDA GMAELLVPWA
GHRQRVVRLL LRAYGFPPRR APRAAVPRHR RW
|
|---|
| |