Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcav_0044 |
Symbol | |
ID | 7858247 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beutenbergia cavernae DSM 12333 |
Kingdom | Bacteria |
Replicon accession | NC_012669 |
Strand | - |
Start bp | 46563 |
End bp | 47999 |
Gene Length | 1437 bp |
Protein Length | 478 aa |
Translation table | 11 |
GC content | 77% |
IMG OID | 643864122 |
Product | transcriptional regulator, GntR family with aminotransferase domain |
Protein accession | YP_002880072 |
Protein GI | 229818546 |
COG category | [E] Amino acid transport and metabolism [K] Transcription |
COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGGCGCAT CCCAGACCGA TCTTGCCTGG GACACGCTTG TCGACCTGGC CCCCGCTGGC GGTGACACCG GGCCCCTGCA CGTCCGGCTC ACGTCGGCGC TGCGCTCGCT CATCGCGTCA GGCGTGGTCC CCGACGGGGC GGCGCTCCCA CCGAGCCGCA CGCTCGCCCG CGACCTCGGC TGCTCGCGCT GGGCGGTGAC CGAGGCGTAC GCGCAGCTCG CCGTCGAGGG GTACCTCACC GCCCGGTCGG GGTCGGTCAC GCGCGTCCGG TCCGGCGTCG CCCCGCCCGC CTCGCCACCT GCCGCGATGC TCGACGACGT CGCCCGCCGC GCGCCGTACG ATCTCGCCCC GGGTGTTGCG GACCTCCGCG CGTTCCCGCG TCACCGCTGG GTCGAGGCCA CGCGCACGGT GCTGAGCGCT CTCCCGGCCG ACGACCTCGC CCGCGCCGTC CCGGGTGGGC ACCCACGGAC GCGCCGCCTG CTCGCCGAGT ACCTTCGGCG CTCGCGCGCC GTCGACACGG GGGCGGCTGC GCTCGTCGTC ACGGCCGGCG CGGGCAGCGC GATGGGCTGG CTCGCCCGGC GCCTCGTCGC TGCCGGGCAC ACCCGGCTCG CCGTCGAGGA GCCGAGCTGG CCCGTGCTGC CGGACCTCGC GCGGCGGGCG GGTCTCGAGA CGGTGCCGAT CGCCGTCGAC GACGACGGAC TGTGCGTCGA CGACCTCCGC GCGCACCCCG ACGTCCGCGC CGTCCTCCTC ACCCCGGCAC ACCAGTTCCC CACGGGGGCC GCGATGTCGC CCGTGCGCCG TGCCGAGGTG ACGGCGTGGG CGCGCGAGCG CGACGGCGTC GTCATCGAGG ACGACTACGA CGCCGAGTTC CGCTACGACC GCAAGCCCGT CGCCGCGCTG CAGGCGCTGG ACCCGCAGCA CGTGGTGCTG CTCGGCTCCC TGTCGAAGTC GCTCTCCTCG GCGGTCGGGC TGGGGTGGCT CGTCGGTCCG ACGGCGCTGC TGGCGGACGT CGCCGAACCG GGCGGGGCGC CGCCGACGCC GGGAGTCCTG ACCGAGCAGA TCGTCGCCGA GATGATCGAG CGCGGCTGGT ACGAGCGGCA CCTGCGCTCC GTGCGGACGG GTCTGCGGCG CCGCCGCGAC GCACTCGTCG CGGCTCTGGG ACGGCGTCTC CCCGACTGCC CGGTCTCCGG GCTCGCCGCC GGCATGCATC TCGTCCTGCG GCTCCCGGCG GACGTCCGAG CCGCCGACGT CGTCGCCCGC GCCGCCGAGC TCGACGTCGG CGTCGTCCCC ATGTCGCGCT ATCTCGGCGG CGGCGTGGCC GGGCACGGCG GCGTCGCCCG GTCCGACCAG CTCGTCCTCG GCTACGGGAA CCTCGCCGAC TCGCGGGTGG AGGACGCCGT CGCCCGCCTC GCGGTCGCCG TCAGATCTCG GGGATGA
|
Protein sequence | MGASQTDLAW DTLVDLAPAG GDTGPLHVRL TSALRSLIAS GVVPDGAALP PSRTLARDLG CSRWAVTEAY AQLAVEGYLT ARSGSVTRVR SGVAPPASPP AAMLDDVARR APYDLAPGVA DLRAFPRHRW VEATRTVLSA LPADDLARAV PGGHPRTRRL LAEYLRRSRA VDTGAAALVV TAGAGSAMGW LARRLVAAGH TRLAVEEPSW PVLPDLARRA GLETVPIAVD DDGLCVDDLR AHPDVRAVLL TPAHQFPTGA AMSPVRRAEV TAWARERDGV VIEDDYDAEF RYDRKPVAAL QALDPQHVVL LGSLSKSLSS AVGLGWLVGP TALLADVAEP GGAPPTPGVL TEQIVAEMIE RGWYERHLRS VRTGLRRRRD ALVAALGRRL PDCPVSGLAA GMHLVLRLPA DVRAADVVAR AAELDVGVVP MSRYLGGGVA GHGGVARSDQ LVLGYGNLAD SRVEDAVARL AVAVRSRG
|
| |