Gene Bcav_0042 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_0042 
Symbol 
ID7858245 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp44445 
End bp45248 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content71% 
IMG OID643864120 
ProductABC transporter related 
Protein accessionYP_002880070 
Protein GI229818544 
COG category[R] General function prediction only 
COG ID[COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACGC TCGACCTGCG CAACGTCGTC AAGACCTATC GGCTGCGGCA CGGGCTGCGG 
CACACGGACC TGCGCGCCGT CGACGACGTC AGCTTCACTC TCGAACCGGG CCGGACGACG
GCGCTCGTCG GTCAGTCCGG GAGCGGCAAG TCGACCGTGG CGAAGCTGCT GCTGCAGCTC
GAGCGGCCGA CGTCGGGCGA GATTCTCGTC GACGGCGTCT CGCTCCACGG GTCACGGGCG
GCGACGAAGG CGTACCGCAG CGCCGTGCAG ATGGTGTTCC AGGACCCGTT CGCGTCGCTG
AACCCGTATC ACTCGGTCGC ACACCACCTC GCCCGGCCCG TGAAGCTGCA CCACCCCGGG
CTCACGGGCG CGCAGGTGGA GGAGCGGGTG CTCTCGCTCC TGAGCCGGGT GCGGCTCGAC
CCGCCGGAGG AGTTCGCGCG GAGACGTCCG CACGAGCTGT CGGGCGGGCA GCGGCAGCGG
GTCGCGATCG CGCGGGCGCT CGCACCCGGT CCGGGCATCC TCATCGCGGA CGAGCCGGTG
TCGATGCTCG ACGTGTCGAT CCGGCTCGGC ATCCTCAACC TGCTGTCCGA GCTGCAGCGC
GAGGAGAATC TCGGCGTCCT GTACATCACG CACGACCTCG CGACCGCGCG GCACTTCTCC
GACGAGATCC TCGTGATGTA CCGCGGGGTG ATCGTCGAGC GCGGCCCCGC CGACGACGTC
ATCCTCAACC CCCAGCACGA GTACACGAAG CTCCTGCGGG AGGCGGCTCC CGACCCGGAG
CGACGCCTGC GCGAGCTGGC ATAG
 
Protein sequence
MTTLDLRNVV KTYRLRHGLR HTDLRAVDDV SFTLEPGRTT ALVGQSGSGK STVAKLLLQL 
ERPTSGEILV DGVSLHGSRA ATKAYRSAVQ MVFQDPFASL NPYHSVAHHL ARPVKLHHPG
LTGAQVEERV LSLLSRVRLD PPEEFARRRP HELSGGQRQR VAIARALAPG PGILIADEPV
SMLDVSIRLG ILNLLSELQR EENLGVLYIT HDLATARHFS DEILVMYRGV IVERGPADDV
ILNPQHEYTK LLREAAPDPE RRLRELA