| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_0015 |
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| Symbol | |
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| ID | 7858217 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Beutenbergia cavernae DSM 12333 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012669 |
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| Strand | + |
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| Start bp | 15643 |
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| End bp | 17055 |
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| Gene Length | 1413 bp |
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| Protein Length | 470 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 643864092 |
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| Product | extracellular solute-binding protein family 1 |
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| Protein accession | YP_002880043 |
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| Protein GI | 229818517 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.768674 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCCCAC GCAACACCCC GACCGGGCGA GCGGGCGTCG CGCCCGCAGG CCCGAACCCC
CACGGAACCG CACCCGAGAG CGCAGGCCGC GCGACGCCGT CGTCCCTCAC CCGACGACGT
CTGCTGACCG GCGGCGCCGG GCTCCTCGGC GCGGGAGCAC TCGCCTCGCT GGCGGCGTGC
GGCACGCCGA GCGCCTCGGG CGCCACGCAG CAGAATCTCA GCTTCTGGCA CCTGCTCTCG
GGTCCCGACG GCGTGACGAT GGGCTCGCTC GTCGACGGCT TCAACGGCTC GCAGGACGTC
GCGAGCCTCA CCCAGACCGT GCTCGCCTGG GGCTCGCCGT ACTACACGAA GCTCGCGATG
GCCTCGGCCG GTGGCCGCGC GCCCGACGTC GCGATCATGC ACGCCGCCCG GGTTCCCGGG
TACGCGCCCG GTGGCCTGCT GGACTCCTGG GACATGGACC TCTTCGCCGA GCTGGGCATC
CGCGAGGAGG ACTTCCCGGA GCGGATCTGG GCCAAGAGCC TGCACGACGG CGAGCTGACC
GCCGTCTGTC TCGACTCGCA CCCGTTCGTC CTGTACTACA ACACCGAGAT CGCTGAGGCG
GCCGGCGCGC TCGGCTCCGA CGGCCTGCTG GAGGAGGCGA CGACGCCGGA GCAGTTCCGC
GATCTCGCCG CCCGCCTCGG CGACGCCAGC GACGGCGGCC ACGGCCTCGC GTTCGGCTAC
CTCGGCGACG GCTCGAACAT GTGGCGCATG TTCTCGACGT ACTACACGCA GATGGGCGGC
ACGGTCGAGC TCCCGATCGG CGGGACGATG CAGTACGACG AGGGCCTCGC CGTCGACACC
CTCGAGTGGA TCCTCTCCCT CATCGACGGC GACATCGGCA ACGCCAGCCA CGACGGCGGC
ACAGCGATCT CCGAGTTCAT CACCGGCAAG GCCGGGATGT TCTACGGCGG CGTCTGGGAG
ACCGGCAACT ACAAGGCGCA GGGCGTGCCG TTCGACATCA GCCTCGTGCC CAACGTGTTC
GGAACGCCCG CCGCGTACGC CGACTCGCAC GCGTTCGTCC TGCCGCACCA GACGAACCCG
GACCCTGAGC GGCGTCGCCT CGTGCACGAG TTCGTGGCGT ACGTGCTCAA GAACTCGCTC
GACTGGGCCG CCGCCGGCCA CATCCCGGCC TACAGCCCCG TGGTCGACGA CCCGGCGTAC
GACGACCTCG TCCCCCAGTC GCACTACGCC GACGCCACCG ACTACCTCGT CTACGACCCC
GAGGCCTGGT TCTCCGGCTC CGGGTCGGAC TTCCACCGGT ACTTCGGCGA CCACATGCAG
AACGTGTTCA TGCGCACGGT CCCGCCGATC GACGGCCTCA ACGGGTTCGT CGAGCGGATC
AATGCGCTCC TCGCCAAGCC GAGCCCGGTA TGA
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| Protein sequence | MPPRNTPTGR AGVAPAGPNP HGTAPESAGR ATPSSLTRRR LLTGGAGLLG AGALASLAAC
GTPSASGATQ QNLSFWHLLS GPDGVTMGSL VDGFNGSQDV ASLTQTVLAW GSPYYTKLAM
ASAGGRAPDV AIMHAARVPG YAPGGLLDSW DMDLFAELGI REEDFPERIW AKSLHDGELT
AVCLDSHPFV LYYNTEIAEA AGALGSDGLL EEATTPEQFR DLAARLGDAS DGGHGLAFGY
LGDGSNMWRM FSTYYTQMGG TVELPIGGTM QYDEGLAVDT LEWILSLIDG DIGNASHDGG
TAISEFITGK AGMFYGGVWE TGNYKAQGVP FDISLVPNVF GTPAAYADSH AFVLPHQTNP
DPERRRLVHE FVAYVLKNSL DWAAAGHIPA YSPVVDDPAY DDLVPQSHYA DATDYLVYDP
EAWFSGSGSD FHRYFGDHMQ NVFMRTVPPI DGLNGFVERI NALLAKPSPV
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