| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_0006 |
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| Symbol | gyrB |
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| ID | 7858206 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Beutenbergia cavernae DSM 12333 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012669 |
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| Strand | + |
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| Start bp | 6462 |
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| End bp | 8519 |
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| Gene Length | 2058 bp |
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| Protein Length | 685 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 643864081 |
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| Product | DNA gyrase subunit B |
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| Protein accession | YP_002880034 |
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| Protein GI | 229818508 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit |
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| TIGRFAM ID | [TIGR01059] DNA gyrase, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 53 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCAGACA CGCACGAGAC CGTCGAGGAC ACGATCGACA CCACGAACGG TTCGGCATCC
GGGTACGACG CCAGCAACAT CACCGTCCTC GAGGGTCTCG AGGCGGTGCG CAAACGCCCC
GGCATGTACA TCGGCTCCAC GGGCGAGCGC GGGCTCCACC ACCTGGTCTC CGAGGTCGTC
GACAACTCCG TGGACGAGGC CCTGGCCGGG TACGCGACGA GGATCGACGT CACGCTCACC
GAGGACGGCG GGGTCCGGGT CGTCGACGAC GGCCGCGGCA TCCCGGTCGA CATCGTCGAG
TCCGAGGGCA AGCCGGCCGT CGAGGTCGTG CTGACGGTGC TGCACGCGGG CGGGAAGTTC
GGCGGCGGCG GGTACGCCGT CTCCGGCGGG CTGCACGGCG TCGGCGTCTC GGTGGTCAAC
GCGCTCTCGC ACCGCCTCGA GGTCGAGGTC CGGGTGCAGG GCAGCGTGTG GCGCCAGTCC
TACACCGACG GCGTCCCGGA CGCCCCGCTC GAGCGGGGCG AGGCCACCGA CGTCACCGGC
ACCACCGTGA CGTTCTGGCC GAACGGCGAC ATCTTCGAGA CCACCGTCTT CGACTTCGAG
ACCCTGCGTG GCCGCTTCCA GCAGTACGCG TTCCTCAACA AGGGCCTGGA GATCTCGCTG
ACGGACGAGC GCCGCGAGTC CGGCACCGGT GACGAGGTCG CCGGCGAGCA CGCGGACGAG
GAGACGTCGG TCCAGCTGCG CGACGAGTCC CACGAGCGCA CCGTGACCTA CCGCTACGAC
GACGGTCTCG TGGACTACGT GCGCCACATC AACGCGGCGA AGCGCGCCGA CCTCGTGCAC
CCGGAGATCA TCGACTTCGA GGCGGAGGAC GTCGAGCGCA CGATCTCGCT CGAGATCGCG
ATGCAGTGGA CGAGCGCCTA CAGCGAGAGC GTCCACACGT ACGCGAACAC GATCAACACG
TCCGAGGGAG GCACGCACGA GGAGGGGTTC CGGGCGGCGC TGACGACGCT CGTCAACCGG
TACGCGCGCG AGAAGAACCT GCTCAAGGAG AAGGACGACA ACCTCACGGG CGAGGACGTC
CGCGAGGGAC TGACCGCCGT CCTGTCCATC AAGCTCGGCG AACCGCAGTT CGAGGGTCAG
ACCAAGACGA AGCTCGGGAA CACCGAGGCG CGGACGTTCA CCCAGAAGGT CGTCTTCGAC
CAGCTCGGCG ACTGGCTGGC CTCCCACCCG AACGAGGCGC GGGAGATCGT CCGGAAGGCG
ATCCAGGCGT CGGCGGCACG GATGGCGGCC CGCAAGGCCC GCGAGGCGAC CCGGCGCAAG
GGGCTGCTCG AGGGCGTCGG GATGCCCGGC AAGCTCAAGG ACTGCTCGAG CCGCGACGCG
AGCGTGTCCG AGGTCTTCAT CGTCGAGGGT GACTCCGCCG GCGGCTCGGC CGTGCAGGGC
CGCAACCCGG AGACGCAGGC GATCCTGCCG ATCCGCGGGA AGATCCTCAA CGTCGAGAAG
GCGCGGCTGG ACAAGGCCCT GGGCAACCAG GAGGTCCAGG CGCTCATCAC GGCGTTCGGG
ACCGGCATCG GCGAGGACTT CGACCTCAGC AAGCTCAGGT ACCACAAGAT CGTGCTGATG
GCGGATGCCG ACGTCGACGG TCAGCACATC TGCACGCTGC TGCTCACCCT GCTGTTCCGG
TACATGCGGC CGCTCGTCGA GCACGGGCAC GTCTACCTGG CGATGCCGCC GCTGTACAAG
CTCAAGTGGA CGAACGGCCC GCACGACTAC GTGTATTCCG ACCGGGAGCG CGACGCGCTG
CTCGAGGCCG GGCGGGCCGC TGGCCGGCGC CTGCCGAAGG ACGGCGGGAT CCAGCGGTAC
AAGGGTCTCG GCGAGATGGA CTACCGGGAG CTCTGGGAGA CCACGATGGA CCCTGACACG
CGCACGCTCA AGCAGGTGAC GATCGGCGAG GCGGCCATGG CCGACGAGAT CTTCGCCGTC
CTCATGGGTG AGGACGTGGA GTCCCGCCGC TCGTTCATCC AGCGCAACGC CCGCGACGTC
CGCTTCCTCG ACATCTAG
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| Protein sequence | MADTHETVED TIDTTNGSAS GYDASNITVL EGLEAVRKRP GMYIGSTGER GLHHLVSEVV
DNSVDEALAG YATRIDVTLT EDGGVRVVDD GRGIPVDIVE SEGKPAVEVV LTVLHAGGKF
GGGGYAVSGG LHGVGVSVVN ALSHRLEVEV RVQGSVWRQS YTDGVPDAPL ERGEATDVTG
TTVTFWPNGD IFETTVFDFE TLRGRFQQYA FLNKGLEISL TDERRESGTG DEVAGEHADE
ETSVQLRDES HERTVTYRYD DGLVDYVRHI NAAKRADLVH PEIIDFEAED VERTISLEIA
MQWTSAYSES VHTYANTINT SEGGTHEEGF RAALTTLVNR YAREKNLLKE KDDNLTGEDV
REGLTAVLSI KLGEPQFEGQ TKTKLGNTEA RTFTQKVVFD QLGDWLASHP NEAREIVRKA
IQASAARMAA RKAREATRRK GLLEGVGMPG KLKDCSSRDA SVSEVFIVEG DSAGGSAVQG
RNPETQAILP IRGKILNVEK ARLDKALGNQ EVQALITAFG TGIGEDFDLS KLRYHKIVLM
ADADVDGQHI CTLLLTLLFR YMRPLVEHGH VYLAMPPLYK LKWTNGPHDY VYSDRERDAL
LEAGRAAGRR LPKDGGIQRY KGLGEMDYRE LWETTMDPDT RTLKQVTIGE AAMADEIFAV
LMGEDVESRR SFIQRNARDV RFLDI
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