| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_0003 |
|---|
| Symbol | |
|---|
| ID | 7858203 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | + |
|---|
| Start bp | 3525 |
|---|
| End bp | 4418 |
|---|
| Gene Length | 894 bp |
|---|
| Protein Length | 297 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 643864078 |
|---|
| Product | 6-phosphogluconate dehydrogenase-like protein |
|---|
| Protein accession | YP_002880031 |
|---|
| Protein GI | 229818505 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1023] Predicted 6-phosphogluconate dehydrogenase |
|---|
| TIGRFAM ID | [TIGR00872] 6-phosphogluconate dehydrogenase (decarboxylating) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 49 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCACATCG GACTCGTCGG GATCGGTCGG ATGGGCGCGA ACATGCAGGA GCGCCTGCGC
GAGCACGGCC ACGAGGTGAC GGGCTACGAC CAGGACCCGG GCGTGTCCGA CGTCGCCAGC
CTGGAGCAGC TGGTGGCCGC GCTCCCAGCA CCGCGGGTGG TGTGGGTGAT GGTGCCGGCG
GGCGAGATCA CGCACGCGGT GATCGGCGAC CTCCGAGGCC TCCTCGCCGC CGGTGACCTC
GTGATCGACG GCGGCAACTC CAACTTCCGC GAGGACAAGG TGCACGCCGA CGACCTCGCG
GGTCACGGCA TCCGCTACCT CGACGTCGGC GTCTCCGGTG GTGTCTGGGG CCGCGAGAAC
GGGTACGGGC TCATGGTCGG CGGAGCACCG GACGACGTCG CCGAGGTGAT GCCGGTCTTC
GACGCGCTCC GCCCGGAGGG CGATCGTGAC GAGGGCTTCG TCCACGTGGG GCCGGTGGGC
GCGGGGCACT ACGCGAAGAT GGTGCACAAC GGCATCGAGT ACGGCCTCAT GCAGTCCTAC
GCCGAGGGCT ACGAGATCCT GGCGGCGCGG GACGACCTCG TGGCCGACGT CGGCGGGGTG
TTCAAGGCGT GGCAGCGCGG CACGGTGGTG CGGTCCTGGC TCCTCGAGCT CATGGTGCGC
GCGCTGGAGC AGGACCCGGA CCTGGAGCAG ATCTCCGGCT GGACGGCGGA CTCCGGCGAG
GGCCGGTGGA CGGTGCAGGA GGCGGTGGAG CACGCCGTCC CGGCGCCGGT GATCAGCGCG
GCCCTGTTCG CCCGGTTCGC GTCCCGGCAG GAGGACTCGC CGGCGATGAA GGCCGTCGCG
GCGTTGCGGC AGCAGTTCGG CGGGCACGCC ACGAAGCCCG CCGCGGACGG CTGA
|
|---|
| Protein sequence | MHIGLVGIGR MGANMQERLR EHGHEVTGYD QDPGVSDVAS LEQLVAALPA PRVVWVMVPA
GEITHAVIGD LRGLLAAGDL VIDGGNSNFR EDKVHADDLA GHGIRYLDVG VSGGVWGREN
GYGLMVGGAP DDVAEVMPVF DALRPEGDRD EGFVHVGPVG AGHYAKMVHN GIEYGLMQSY
AEGYEILAAR DDLVADVGGV FKAWQRGTVV RSWLLELMVR ALEQDPDLEQ ISGWTADSGE
GRWTVQEAVE HAVPAPVISA ALFARFASRQ EDSPAMKAVA ALRQQFGGHA TKPAADG
|
|---|
| |