Gene Avin_51800 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_51800 
SymbollacY 
ID7764017 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp5276156 
End bp5277439 
Gene Length1284 bp 
Protein Length427 aa 
Translation table11 
GC content67% 
IMG OID643807996 
Productgalactoside permease 
Protein accessionYP_002802230 
Protein GI226947157 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2223] Nitrate/nitrite transporter 
TIGRFAM ID[TIGR00882] oligosaccharide:H+ symporter 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATCTCC CGTTAAAACG CGAATACTGG CTGATCAGTG GCCTGCTGTT TTTCTTCTTC 
TTCGCCTGGT CGTCGAGCTA TTCGCTGTTC TCGATCTGGC TGCACCGGGT CATCGGTCTG
AGCGGTACGG AAACCGGCTT CATCTTCGCC GCCAACGCCA TCGCCGCGCT GTTCATCCAG
CCCTTCTACG GCGCCCTGCA GGACCGCCTG GGCCTGTCCC GCAGGCTGCT GGTCTGGATC
GGCGTGCTGC TCGCCTGCGC CGCGCCCTTC GCGATCCACG TCTACGCCGG CCTGCTGGCC
CACGACGTGG TGCTCGGCGC CCTGGTCGGC GCCGCCTTCC TGGCCTTCGC CATGCTCGCC
GGCGTGGGCG TCATCGAGTC CTATACCGAG CGGCTGTCGC GCCACGCCGG CTTCGAGTTC
GGCACCACGC GGATGTGGGG CTCGCTGGGC TGGGCGGCCG CGACGGGCGT GGCCGGCGTG
GTGTTCGACA TCGACCCGGA CATCGCCTTC TACATGAGCA GCGCCGCCGG CCTGGCGTTC
CTGCTGATCC TCTCCCGGCT GGACATGGAC GCCTTCAGGA ACCACGAGAC GCGGGCCGGC
GAGTCCGCCC CGGTACGCAC CGCCGACATC CTGCAACTGC TGCGCCTGCC GCGCTTCTGG
GCGTTCAGCC TGTTCCTGAC CGGGGTCGCC GGGGTCTACA TGATCTACGA GCAGCAGTTC
CCGGTGTACT TCGCCTCCTT CTTCCCTACC CCGGAAGAAG GCACCCGCGC CTACGGCTAC
CTGAACTCCT CGCAGGTACT GGTCGAGGCC CTGCTCATGC TGGTCGCGCC CTGGGTGGTC
GCCCGCACCG GCGCCAAATA CGGCCTGCTG CTGGCCGGCA CCATCATGTT CGTGCGCATC
CTCGGCTCGG GGCTGGCCAG CGATGCCTGG ACCATCGCCG CCTGCAAGAT GCTGCATGCC
ATCGAGGTGC CGATCCTGTT GGTCGCGGTG TTCAAGTACA TCTGCGTCAA CTTCGATGCG
CGGCTGTCGG CCACGCTCTA CCTGGTCAGT TTCCAGTTCG CCCAGCAACT GACCGCCATG
CTGTTGTCGC CGGCCGTGGG CTATGGCTAC GACAGGCTCG GCTTCGCCAG CGTCTACCTG
CTGCTGGCCA GTCTGGTCGG CGCCTGCCTG CTGCTGTCCT GGTCGCTGCT GCGCGCCGAC
CCGTCCAGCA AGACCACCCG GGCGGCGGAC GGCGCCCCGG AACTGCCGGC CATCGCCCAG
GCGGCCAACC ATTACGAACC CTGA
 
Protein sequence
MHLPLKREYW LISGLLFFFF FAWSSSYSLF SIWLHRVIGL SGTETGFIFA ANAIAALFIQ 
PFYGALQDRL GLSRRLLVWI GVLLACAAPF AIHVYAGLLA HDVVLGALVG AAFLAFAMLA
GVGVIESYTE RLSRHAGFEF GTTRMWGSLG WAAATGVAGV VFDIDPDIAF YMSSAAGLAF
LLILSRLDMD AFRNHETRAG ESAPVRTADI LQLLRLPRFW AFSLFLTGVA GVYMIYEQQF
PVYFASFFPT PEEGTRAYGY LNSSQVLVEA LLMLVAPWVV ARTGAKYGLL LAGTIMFVRI
LGSGLASDAW TIAACKMLHA IEVPILLVAV FKYICVNFDA RLSATLYLVS FQFAQQLTAM
LLSPAVGYGY DRLGFASVYL LLASLVGACL LLSWSLLRAD PSSKTTRAAD GAPELPAIAQ
AANHYEP