| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_51740 |
|---|
| Symbol | nhaA |
|---|
| ID | 7764012 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Azotobacter vinelandii DJ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012560 |
|---|
| Strand | - |
|---|
| Start bp | 5268468 |
|---|
| End bp | 5269808 |
|---|
| Gene Length | 1341 bp |
|---|
| Protein Length | 446 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 643807991 |
|---|
| Product | Na+/H+ antiporter NhaA |
|---|
| Protein accession | YP_002802225 |
|---|
| Protein GI | 226947152 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG3004] Na+/H+ antiporter |
|---|
| TIGRFAM ID | [TIGR00773] Na+/H+ antiporter NhaA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.9845 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGAAG CCCCGCAGGA AGGCTCCGAT TTTGCCCGTC TGCCCCATGA GTCCGTGCAC
CGGCTGACCA AACCGCTGGC CTGGTTCCTA CGCATCGAGG CCGTCGCTGC CGCCGTTCTG
CTGTTCTTCA CGATCGCTGC CGTGGGGCTT GCCAATTCGC CCTGGGCCGA GGCCTTTCTG
GGCGTATGGG AAACCCCGCT GGGACTCCGG GTTGGCTCGC AGGAGTTTGT TCGCTCCATA
AAAGACTGGA TCAGTGACGG GCTGATGACG CTATTCTTCT TCCTCGTCGC CGTGGAGCTC
AAGCGGGAAC TGGTCCTGGG CGAGTTGCGT CATCCGCGCA TGGCCGCCTT GTCGGTCTCG
GCGGCTCTGG GGGGCATGGC GGTACCGGCG GCGCTGTACC TGCTCCTGCA GTCGGGGCAG
GCCGGCGAGG CGGGCTGGGG CGCGGTCATG GCCACCGATA CCGCCTTCGT GATCGGCTGC
CTGGCGCTGT TGAGATCCCG CATCCCGCAA AGCCTGCGGA TATTCATGCT ATCGCTGGCG
ATCGTCGACG ATATTGGCGC CATCCTGGTG GTCGCCATCG GCTATGGCCA CCACCTGGCG
TGGAGTGCGC TGGTTGCCGC GGCCGTGGGA CTCGTGGTGG TCCGCCTGAT GGCTCACGTC
GGCATCCGCA GCATGCCGCT CTACATCCTG GCCGGCATTT CCATCTGGTT CGCCGTCGAC
CGCTCCGGAA TCCATGCGAC CATCACCGGT GTTGTTCTTG GGCTGATGAC GCCCACGGGC
CGATGGGTCA GCGACGAGCG GCTGTACCGC ATTCTCGATC GGGTCGTCGC CCATCCGGCC
GGCAATAATA ATGAAGGGAG CGGGGCGACC CAAGACCGGC AGTCCTTGCG CCTGGCGGAA
ACCGCGGCGC GCGAAACCCT GGCGCCGGCC GAACGGATCC AGATCGCCCT GCATCCGTGG
ATCGCCTATT GTGTCATGCC GCTCTTCGCC TTCGCCAACG CCGGGGTGCC GCTCTCCATG
GGCGATCTCG GCGATGCCGT CACCGTTGCG GTGTTCGTCA GCTTCGCCCT CGGCAAGCCC
GTCGGCATCC TGGCCTTCAC CTGGTTGGCG CTGCGTCTGG GCGCGGTGAA GCCCCCGGAA
CTCGACTGGA AGCTGCTGGT CGGTGGCGGC ATCCTCGCCG GGATCGGCTT TACCATGGCG
CTGTTCATCA GCAATCTGGC GTTCGACAAG AGCCTGATCA ACCAGGCCAA ACTGGGCATC
TTCCTCGCCT CGCTCTTTTC CGCCGCCGCA GGCCTCACGC TCCTGTTCTG GGTGACTCGC
CAGAAAAGTC GCGCCCTGTA A
|
|---|
| Protein sequence | MPEAPQEGSD FARLPHESVH RLTKPLAWFL RIEAVAAAVL LFFTIAAVGL ANSPWAEAFL
GVWETPLGLR VGSQEFVRSI KDWISDGLMT LFFFLVAVEL KRELVLGELR HPRMAALSVS
AALGGMAVPA ALYLLLQSGQ AGEAGWGAVM ATDTAFVIGC LALLRSRIPQ SLRIFMLSLA
IVDDIGAILV VAIGYGHHLA WSALVAAAVG LVVVRLMAHV GIRSMPLYIL AGISIWFAVD
RSGIHATITG VVLGLMTPTG RWVSDERLYR ILDRVVAHPA GNNNEGSGAT QDRQSLRLAE
TAARETLAPA ERIQIALHPW IAYCVMPLFA FANAGVPLSM GDLGDAVTVA VFVSFALGKP
VGILAFTWLA LRLGAVKPPE LDWKLLVGGG ILAGIGFTMA LFISNLAFDK SLINQAKLGI
FLASLFSAAA GLTLLFWVTR QKSRAL
|
|---|
| |