Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avin_51570 |
Symbol | |
ID | 7763996 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Azotobacter vinelandii DJ |
Kingdom | Bacteria |
Replicon accession | NC_012560 |
Strand | + |
Start bp | 5245065 |
End bp | 5246582 |
Gene Length | 1518 bp |
Protein Length | 505 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 643807975 |
Product | multidrug efflux pump RND-family outer membrane protein |
Protein accession | YP_002802209 |
Protein GI | 226947136 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0329698 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACACG GATACCTGAC CCTGGCGGCC GCCTGCGCCC TGGCACTGCC GGGCTGCACC CTGATCCCGG ACTACCTGCG CCCGGCCGCG CCGGTCGAGG CCGCCTGGCC GGAGGGGGCC GCCTACGCGC CGGAGCGACC GGCCAACGTG CCGGCCGCGG ATGTCGGCTG GGAGGAGTTC TTCCGCGATC CGGCGCTCAA GCAACTGGTC GAACTGGCCC TGGACAACAA CCGCAACCTG CGCCAGGCGA TCCTCAACGT GGATGCCTAC CGGGCGCTGT ACCGCGTGCA GCGTTCCGAC CTGTTCCCCA AGCTCGGCGT GGAAGGCACC CAGAGCCGCC AGCGCTGGCC GGGCGACTAT GCCAGCGGCG GCGGCGGCGG GTCCAGCGGC GGCATCAGCG ATGGCGGCGG CGCGGGCGGC ACCTCGACCA GCGAGCCCCC GGCGTTCATC CAGACCAGCC ACCAGGTGAC CCTCGGCACC AGTTCCTGGG AACTGGACTT CTTCGGACGC ATCCGCAGCC TCACCGAGCA GGCCAAGGAA GACTACCTGG CCATCGAGGA AAACCGACAG AACGTGCACC TCGTCCTGGT CGGCGACGTG GCCACCGCCT ACTTCGCCTG GCGCACCGAC CAGGCCCTGC TCAAGCTGAC CGAAGCGACC CTGGCCAGCT ACGAGGAAAG CCTCGCGCTG ATCGAGGCCA GCGAGGAAGT CGGCGTTTCC TCGCAGCTCG ACGTGCGCCA GGCGCACACC CTGGTGGACC AGGCCCGCGC GCAGAAGTCG CTCTACACCC GGCAGATCGC CGAGGACGTC AACGCCCTGC GGCTGCTGAT CGGCGGTGCC TTCCCGAGCG ACCTGCCGGC CGGCCTCGAC GTCAACGACG AGATGCTCGC CGGCTTCCCC GCCGGGCTGC CCTCCGACCT GCTGCTGCGC CGGCCGGACA TCCGCGCCGC CGAACACCGC CTGCTGGCCG CCAACGCCAG CATCGGCGCG GCGCGCGCGG CGTTCTTCCC GAGCGTCACC CTGACCGCCC GGGCGGGTAC CGCCAGCCGC GAGCTGTCGG GTCTGTTCGA CGCCGGCTCC GGCAGTTGGA GCGCCTTGCC GACGATCAAC ATCCCGATCT TCACCTTCGG CGATCTCAGG GGAAGTCTGG AATACGCCAA GCTGCAGAAG GAAATCAACG TCGCCGCCTA CGAGTACAGC ATCCAGACCG CCTTCCGCGA GGTCGCCGAC GGCCTGGCCG CGCGCGGCAC CTACGATACC CAGCTCAAGG CCCAGGGCGA CCTGGTCGAC AACAACCAGG CGTACTACGA ACTGGCCCGC CAGCGCTACG AGGAAGGCGT CGACAGCTAC CTGTCGGTGC TCGACGCCCA GCGCGAACTC TTCTCCGCCC AGCAGCAACT GCTCAACGAC CGTCTCCTGC AACTGAATGG CGAAGTCGGC CTGTACAGGG CGCTCGGCGG CGGCTGGGAG CGCAACAGCG TCGCGGGCGC GACCACCACG GCGGCCGCCA CGCCGTAA
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Protein sequence | MKHGYLTLAA ACALALPGCT LIPDYLRPAA PVEAAWPEGA AYAPERPANV PAADVGWEEF FRDPALKQLV ELALDNNRNL RQAILNVDAY RALYRVQRSD LFPKLGVEGT QSRQRWPGDY ASGGGGGSSG GISDGGGAGG TSTSEPPAFI QTSHQVTLGT SSWELDFFGR IRSLTEQAKE DYLAIEENRQ NVHLVLVGDV ATAYFAWRTD QALLKLTEAT LASYEESLAL IEASEEVGVS SQLDVRQAHT LVDQARAQKS LYTRQIAEDV NALRLLIGGA FPSDLPAGLD VNDEMLAGFP AGLPSDLLLR RPDIRAAEHR LLAANASIGA ARAAFFPSVT LTARAGTASR ELSGLFDAGS GSWSALPTIN IPIFTFGDLR GSLEYAKLQK EINVAAYEYS IQTAFREVAD GLAARGTYDT QLKAQGDLVD NNQAYYELAR QRYEEGVDSY LSVLDAQREL FSAQQQLLND RLLQLNGEVG LYRALGGGWE RNSVAGATTT AAATP
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