| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_51560 |
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| Symbol | |
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| ID | 7763995 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Azotobacter vinelandii DJ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012560 |
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| Strand | + |
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| Start bp | 5241928 |
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| End bp | 5245068 |
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| Gene Length | 3141 bp |
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| Protein Length | 1046 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 643807974 |
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| Product | multidrug efflux pump RND-family transporter protein |
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| Protein accession | YP_002802208 |
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| Protein GI | 226947135 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family
[TIGR01131] ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes) |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.793904 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGCGCT TTTTCATCGA CCGGCCGATC TTCGCCTGGG TGATCGCCCT GGTGCTCATG
CTCGGCGGCG GCCTGGCCAT CCTCAAGCTC TCCGTCACCC AGTACCCGAA CATTTCCCCG
CCGGCCGTGC AGATCAGCGT CACCTATCCC GGCGCCTCGG CGCAGACGGT GCAGGACACC
GTGGTGCAGG TGATCGAGCA GCAGCTCAAC GGCCTCGACG GCCTGCGCTA TATTTCCTCG
GTCAGCAACG CCGACGGCAG CCTGCAGATC ATCGTGACCT TCGAACAGGG CACCAACCCC
GACATCGCCC AGGTGCAGGT GCAGAACAAG CTGCAACTGG CCACGCCGAT GCTGCCCGAG
GAAGTCCAGC GCCAAGGCAT CCGCGTGGTG AAATACCAGG TCAACTTCAT GATGATCCTC
GGCCTGGTGT CCACCGACGG GCGCATGAAC GGTTTCGACA TGGGCAACTA CATCGCCTCC
AACCTCCAAG ACCCGATCTC GCGGGTCTAC GGGGTCGGCG ACTTCCAGGT GTTCGGCTCG
CAGTACGCGA TGCGCATCTG GCTCGACCCG GAGAAGCTCA ATAACTACCA ACTCACCCCG
CAGGACGTGA CCAGCGCGAT CAGCGCGCAG AACGTGCAGG TGTCCTCCGG CCAGCTCGGC
GGCCTGCCGG CCGCCAGGGG CGTGCAACTG AACGCCACGG TGATCGGCAA GACGCGCATG
CGCACCGCCG ACGAATTCAA GGAAATCCTC CTCAAGGTCA ACCGCGACGG CTCGCAGGTC
CGCCTCAAAC ACGTCGCCGA GGTCGGCCTG AGCGCCGAGA ACTTCTCCAT CGCCTCCAAG
TACAACGGCA TGCCGGCCGC CGGTATGGCC CTGCGTCTGG CGCCCGGCGC CAACCTGCTG
GAGAGCGTGG CGGCGGTGCG CGCCAAGCTG GACGAACTCA AGCCCTACCT GCCCGAGGGC
GTCGAGGTGG TCTACCCCTA CGAGACCGCG CCGATGGTCT CCGCCTCCAT CGAGGCGGTG
GTGCACACCC TGTTCGAGGC CATCGTGCTG GTCTTCCTGG TGATGTACCT GTTCCTGCAG
AACTTCCGCG CCACCCTGAT CCCCACCCTG GCGGTGCCGG TGGTACTGCT GGCCACTTTC
GGCGTGCTGT TCGCCTGCGG CTTCACCATC AACGTCATGA CCATGTTCGC CATGGTGCTG
GCCATCGGCC TGCTGGTGGA CGACGCCATC GTGGTGGTGG AGAACGTCGA GCGGATCATG
GTCGAGGAAG GACTGTCGCC GAAGGAGGCG ACGCGCAAGT CGATGGGCCA GATTTCCGGC
GCGCTGGTCG GCATCGCCCT GGTGATTTCC GCGGTGTTCC TGCCGATGGC CTTCTTCGGC
GGCTCCGCCG GGGTCATCTA CCGGCAGTTC TCCATCACCA TCATCTCGGC GATGTCCTTC
TCGGTGCTGA TCGCGCTGAT CTTCACCCCG GCGCTCTGCG CCACCCTGCT CAAGCCGGTG
GCCAAGGGCG CGCACCACGA GAAGCGCGGC TTCTTCGGCT GGTTCAACCG CACCTTCGAG
CGCAGCGCCG ACGGCTACCA GCGCGGCGTG GGCGGCATCA CCAGGCGCCG CTGGAGCTTC
ATGCTGATCT ACCTGCTGCT GGTCGGCGGC GTCGCCTACC TGTTCCTCAG ATTGCCCGGC
TCCTTCCTGC CCAACGAGGA CCAGGGCACC ATGTTCGTGC AGATACAGTT GCCGCCGAAC
TCCAGCGCCG AGCGCACCGA GGCGGTGCTC GCCGAGACGC GCGACTACCT GCTCAAGGAC
GAGGGCGATA CCGTGGCCTC GGTGTTCAGT GTCAACGGCT TCAACTTCGC CGGCCGCGGG
CAGAGCTCGG GCCTGCTGTT CATCAACCTC AAGCCCTTCA GCGAACGACC CAGGCCCGAG
CAGGACATCT TCGCCCTGGC CCAGCGCGCG GCCGTGCGCT ACGCGCGGAT CAAGGACGCC
AACGTGATTC CGGTGGTGCC GCCGGCAGTG CGCGAGATGG GCAACGCCAC CGGCTTCGAC
CTCTTCCTGC AGGACTACGG CGGCCTCGGC CACGAGGCGC TGATGGCGGC GCGCAACCAG
CTCCTCGGGA TGGCCGCCAA GGAGCCGACG CTGACCATGG TGCGTCCCAA CGGCATGAAC
GACGAGGCGC AGTACCAGGT GATCATCGAC GACGAGAAGG CCCGCGCGCT GCAGGTCTCC
ATCGAAGACA TCAACGAAAC CATGTCGGTG GCCTGGGGTT CCTCCTATGT CAACGACTTC
ATCGACCGCG GCCGGGTCAA GAAAGTCTAC GTGCAGGGCA AGCAGGATTC GCGGGTGGGT
CCGGAAGACT TCGACAAGTG GTACGTGCGC AACGCCGAGG GCGGCATGGT GCCCTTCTCG
GCCTTCGCCA GCGGCCAGTG GATCTACGGC TCGCCCAAGC TGGAACGCTA CAACGGCATC
TCCTCGGTGG AGGTTCTCGG CCAGCCGGCG CCCGGCTACA GCACCGGCGA CGCCATGGCC
GTGATGAACC GCCTCGCCGC CCAGTTGCCG TCGGGCATCG GCATCGCCTA CACCGGCCTG
TCCTACGAGG AACTGGCCGC CGGCTCGCAG GCGCCGGCAC TCTACGCGCT GTCGCTGCTG
ATCGTGTTCC TCTGCCTGGC GGCGCTGTAC GAAAGCTGGT CGATTCCTTT CTCGGTGATG
CTGGTGGTGC CGCTCGGGGT GCTCGGCGCG GTCGGCGCCA CGCTCTTGCG CGGGCTGTCC
AACGACGTGT TCTTCCAGGT CGGCATGCTC ACCACCATGG GCCTGGCGGC GAAGAACGCG
ATCCTCATCG TCGAGTTCGC CAAGGATCTG TACGAGCACC AGGGCCGCAG CCTGATGCAG
GCCGCCAGCG AGGCCGCGCG CCTGCGCCTG CGGCCGATCA TCATGACCTC GATCGCCTTC
GCTCTCGGCG TGCTGCCGCT GGCCACCGCC ACCGGCCCCG GCAGCGGCAG CCAGCACTCG
ATCGGCACCG GCGTGCTCGG CGGGACCCTG GCGGCAACCT TCCTGGCGAT CTTCTTCGTG
CCGCTGTTCT ACGTCGTGGT GGTCGGATTG TTCGAGCGGC AAAAAGACAA GGCGGCCGAA
ACCGAAGGAG TGATGGCATG A
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| Protein sequence | MSRFFIDRPI FAWVIALVLM LGGGLAILKL SVTQYPNISP PAVQISVTYP GASAQTVQDT
VVQVIEQQLN GLDGLRYISS VSNADGSLQI IVTFEQGTNP DIAQVQVQNK LQLATPMLPE
EVQRQGIRVV KYQVNFMMIL GLVSTDGRMN GFDMGNYIAS NLQDPISRVY GVGDFQVFGS
QYAMRIWLDP EKLNNYQLTP QDVTSAISAQ NVQVSSGQLG GLPAARGVQL NATVIGKTRM
RTADEFKEIL LKVNRDGSQV RLKHVAEVGL SAENFSIASK YNGMPAAGMA LRLAPGANLL
ESVAAVRAKL DELKPYLPEG VEVVYPYETA PMVSASIEAV VHTLFEAIVL VFLVMYLFLQ
NFRATLIPTL AVPVVLLATF GVLFACGFTI NVMTMFAMVL AIGLLVDDAI VVVENVERIM
VEEGLSPKEA TRKSMGQISG ALVGIALVIS AVFLPMAFFG GSAGVIYRQF SITIISAMSF
SVLIALIFTP ALCATLLKPV AKGAHHEKRG FFGWFNRTFE RSADGYQRGV GGITRRRWSF
MLIYLLLVGG VAYLFLRLPG SFLPNEDQGT MFVQIQLPPN SSAERTEAVL AETRDYLLKD
EGDTVASVFS VNGFNFAGRG QSSGLLFINL KPFSERPRPE QDIFALAQRA AVRYARIKDA
NVIPVVPPAV REMGNATGFD LFLQDYGGLG HEALMAARNQ LLGMAAKEPT LTMVRPNGMN
DEAQYQVIID DEKARALQVS IEDINETMSV AWGSSYVNDF IDRGRVKKVY VQGKQDSRVG
PEDFDKWYVR NAEGGMVPFS AFASGQWIYG SPKLERYNGI SSVEVLGQPA PGYSTGDAMA
VMNRLAAQLP SGIGIAYTGL SYEELAAGSQ APALYALSLL IVFLCLAALY ESWSIPFSVM
LVVPLGVLGA VGATLLRGLS NDVFFQVGML TTMGLAAKNA ILIVEFAKDL YEHQGRSLMQ
AASEAARLRL RPIIMTSIAF ALGVLPLATA TGPGSGSQHS IGTGVLGGTL AATFLAIFFV
PLFYVVVVGL FERQKDKAAE TEGVMA
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