Gene Avin_51400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_51400 
Symbol 
ID7763980 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp5223207 
End bp5224139 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content64% 
IMG OID643807959 
Producttranscriptional regulator AraC family 
Protein accessionYP_002802193 
Protein GI226947120 
COG category[K] Transcription 
COG ID[COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGGGTA ATTCTGTGCT CTGCGATATG CGGGCGAGGG GGCCGGCCAT GAAGGTCATA 
TCCCTGCCAC GCGGCAGGCA TCAGTTGCAC ACCATGCCGA CCAATGCCGG CTATGACCGG
GTACAGGACT GCACCTACCG CTGGGATGGT CGTCGACGTG GCAACACGCC TTTCGCCATC
GTGCAGCACA CCCTCGCGGG GGAGGGCGAC CTGCGCTTCG AGGGGCGTCA CCATCGACTG
CGCGCCGGCG ACACCATGCT GGTGCTGGTC CCGCACGACC ATTGTTACTG GCTGGAGACA
GGGGGTTCCT GGGAATTCTT CTGGATCGCC ATGTACGGCA AGGAAGCCCT CCGCCTGCAG
CGGGCCTTGC TGGACGAGCG CGGTCCGGTG TTGCGCCTGA GCGACAAGAC CATCGAATGC
CTGGCCGAAA ACGTCGCTGC CCTGATCCGT TCGCCGGAAC TGACCGCCGG CCGGGCGTCG
GCCCTGGCCT ACGAGTCGCT CATGGCGTTG CACGACGACC TGCTTGTGCA GGATGTCGCC
TTGGATGCGG CGCGAACGGG GGTGATCGCC TCCATCCAGA ATCACATCCA TGCCTGCCTG
CGTTGCGAGC CCGACACTCT ATCCCCGCAG GCGGAGGACG ACGAACTGGA TGTGGCGAGC
CTGGCCCAGT TAGCTGGCCT GAGCCGCTCC CATTTTTCCC GGCTGTTCGC CCGCACGGTG
GGCATGTCCC CGGCGCAATA TGTCCTGAAT GAACGCATGA AGCGCGCGGC CCACCTACTC
GAAGCGACCG ACCTGTCGGT CAAGGCGATT GCACTGTCGG TGGGCATCCA CGATCCGAAC
TACTTTTCGA AGCTGTTCCG CCACGCCTTC TCCCTGTCCC CCAGCGAGTT CCGCCTCAGC
GGCATGTATG TGAACAGCCG GGGCCGTCTC TGA
 
Protein sequence
MTGNSVLCDM RARGPAMKVI SLPRGRHQLH TMPTNAGYDR VQDCTYRWDG RRRGNTPFAI 
VQHTLAGEGD LRFEGRHHRL RAGDTMLVLV PHDHCYWLET GGSWEFFWIA MYGKEALRLQ
RALLDERGPV LRLSDKTIEC LAENVAALIR SPELTAGRAS ALAYESLMAL HDDLLVQDVA
LDAARTGVIA SIQNHIHACL RCEPDTLSPQ AEDDELDVAS LAQLAGLSRS HFSRLFARTV
GMSPAQYVLN ERMKRAAHLL EATDLSVKAI ALSVGIHDPN YFSKLFRHAF SLSPSEFRLS
GMYVNSRGRL