| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_50950 |
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| Symbol | rnfD1 |
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| ID | 7763943 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Azotobacter vinelandii DJ |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012560 |
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| Strand | - |
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| Start bp | 5164402 |
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| End bp | 5165502 |
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| Gene Length | 1101 bp |
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| Protein Length | 366 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 643807923 |
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| Product | Electron transport complex, RnfABCDGE type, D subunit |
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| Protein accession | YP_002802157 |
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| Protein GI | 226947084 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG4658] Predicted NADH:ubiquinone oxidoreductase, subunit RnfD |
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| TIGRFAM ID | [TIGR01946] electron transport complex, RnfABCDGE type, D subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0710127 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCACCA TCAGCGTCGC GGCGGGGCCG TTCGCCCACG ACCGCTCCTC GGTCAACCGC
ATCATGCTGG ACGTGTGTCT GGCACTCACT CCGGCCACCC TGTTCGGCCT GGTAATGTTC
GGCTGGCCGG CGATCAACCT GTGGCTGGTC ACCTGCGTCA GCGCCCTGGC CATCGAGGCG
GCCTGCCTGC GCCTGCTGGG GCAGCCCATG CGCCGCCTGC TCGATGGTTC GGCCCTGCTC
ACCGGCTGGC TGCTGGCGAT CTCCCTGCCG CCGTGGGCGC CCTGGTGGAT CGGCGTCGGC
GGCAGCCTGT TCGCCATCGG CATCGGCAAG CAACTGTACG GCGGCATCGG CCAGAACCCC
TTCAACCCGG CCATGCTGGC GCGCGTCGCC CTGCTGATCG CTTTCCCGCT GCAGATGACC
ACCTGGGCGC TGCCGCATCC GCTGTTCTCG TCCTCGGCCC CGGGCTTTTT CGACAGCCTG
GCGATCACCT TCGCCGGTGC GCCGCTGGCC GATGGCATGA CCGGCGCCAC CGCGCTGGGC
AACCTGAAGA CCGAGCTGAC CCTCAACCGC ACCGCCCAGG AGATTCTGGA GGGCGGCTTC
AGCACGATCT CGGCGCTGTT CGGCAGCACG CCCGGCAGCC TCGGCGAAAC CTCGGAACTG
CTGTTGCTGG TCGGCGGCGT GTGGCTGGTG CTGCGTCGCA TCATCCACTG GGAAATCCCG
GTCGCGATTC TGGCGAGCGT GTTCGTGATG GCGACCCTCG CGTATCTGAT CAACCCGGAG
CGCTATGCGG GCGGGCTCTA TCAGCTGACC TCCGGCGGCC TGATACTGTG CGCCTTCTTC
ATCGCCACCG ATCCGGTGAC CTCGCCGATC AGCCGCGTCG GCCGGCTGAT CTTCGGTGTG
GGCTGCGGCG TGCTGATCTA CGTGATCCGC ACCTGGGGCA GCTTCCCCGA GGCGGCCGCC
TTCGCGGTGC TCTTCATGAA CGCACTGACC CCGTTGATCG ACCGTTACTG GCGGCCGCGC
GCCTACGGCC GCAACGTCCG GGGCAAGCCG CTGGTCGCGG CCAAGTGGAC CAGCCAGGTT
AAAGAGGTGG ACAAGGTATG A
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| Protein sequence | MSTISVAAGP FAHDRSSVNR IMLDVCLALT PATLFGLVMF GWPAINLWLV TCVSALAIEA
ACLRLLGQPM RRLLDGSALL TGWLLAISLP PWAPWWIGVG GSLFAIGIGK QLYGGIGQNP
FNPAMLARVA LLIAFPLQMT TWALPHPLFS SSAPGFFDSL AITFAGAPLA DGMTGATALG
NLKTELTLNR TAQEILEGGF STISALFGST PGSLGETSEL LLLVGGVWLV LRRIIHWEIP
VAILASVFVM ATLAYLINPE RYAGGLYQLT SGGLILCAFF IATDPVTSPI SRVGRLIFGV
GCGVLIYVIR TWGSFPEAAA FAVLFMNALT PLIDRYWRPR AYGRNVRGKP LVAAKWTSQV
KEVDKV
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