Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avin_50870 |
Symbol | |
ID | 7763935 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Azotobacter vinelandii DJ |
Kingdom | Bacteria |
Replicon accession | NC_012560 |
Strand | + |
Start bp | 5158418 |
End bp | 5160424 |
Gene Length | 2007 bp |
Protein Length | 668 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 643807915 |
Product | Rhs element Vgr protein |
Protein accession | YP_002802149 |
Protein GI | 226947076 |
COG category | [S] Function unknown |
COG ID | [COG3501] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR01646] Rhs element Vgr protein [TIGR03361] type VI secretion system Vgr family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCCCGTC CCACCGACAT TACTACCAGC CTTTCTCTGA CCACTTCGGC CCTGGCGAAT CTGTTTCCGG AGCAGCTCTC CGGCGAGGAG CGGCTGAACG GCCTCGGTAG CCTGCAGTTG CACAGCTATA GCGCCGCCGC ACCGACGCTG GACAGCGTGG TGGCTACGCA CCTGACCGCG ACGCTGCACA ACGATGCCGA CTTGCGCCCG CTGGACGCGC TAATCGCGGA AGTCCGCCAA TTGCCCGGCG ACGCGAGCGC CGACCGTTAC CAAGTACTCC TGCGCCCTTG GCTCTGGTGG CTGACCCTGG CCAGCAACAA CCGGGTGTTC CAGAACAAGA CCACGGGCGA GATCGTCACC GGCATCTTCG ATGGCCATGG CTTCGGCGAT TACCGGTTGA AGCTCTCCGG CAGCTACACG CCGCGCGAGT ACTGCGTGCA GTACAGCGAG ACGGATTTCG CCTTCGTCTC GCGGCTGCTG GAGGAGGAAG GCATCTTCTG GTTCTTCACC CATGAAGAGG GCAGGCACAC CCTGGTGCTG GCCGACGGCA ACGATGCCTT CCCAGCGATC CCCAACGGGC CGAAAGTACC CTATCTGAGC CAGGAAATCG GCGTGCGCGA GCTGCACGGC GTGCGTTCGG CGCAGTACTG CATCCAGGCG GTGGCCGGGG CCTACAGTGC GACCGACTAC GAATTCACCA CGCCCACTAC CTCGCTCTAC AGCCGGGCCG AGGCGCTGGC CGGGTCATTT TCCAGCTACG AGCATCCCGG CGGCTACATC GCCAAGGCGC GCGGCGACGC GCTGACCAAG CAGCGGGTGG ACGGCCTGCG CAGCCAGGAA AAGCGCCTGA TCGGCGAGAG CGACTGCCGC TGGCTGGTGC CGGGGCACTG GTTCACCCTC ACCGGACACG ACGACGCCAA CCTGAACATC GACTGGGTGG TGACCTCGGT GACCCACGAG GCCAGCCACG AGCACTACCG CAACCGCTTC GAGGCGATCC CGAAGGCCAC CAACTACCGT CCCCCGCGCG CGACGCCCAA GCCACGCATG CACACCCAGA CGGCCAGGGT GGTCGGCAAG GCCGGCGAGG AGATCTGGAC CGACCAGTAC GGCCGGATCA AGATCCAGTT CCCCTGGGAC CGCGAGGGGC GGAACGACGA GACCAGTTCC TGCTGGGTGC GCGTGGTATT GCCCTGGAGC GGCAAGAACT TCGGCATGCA GTTCGTTCCG CGCATCGGCC AGGAGGTGAT CGTCACCTTC ATCGACGGCG ATCCGGACCG GCCGCTGGTC ACCGGCTGCG TCTACAACGG CGACAACGCC CTGCCCTACG CGCTGCCGGC CAACCAGACG CAATCGGGCA TCAAGACCAA TTCGTCCAAG GGCGGCGGCG GTTTCAACGA GCTGCGCTTC GAGGACAAGA AGGATGCCGA GGAGGTCTTC CTGCAGGCGC AGAAGGACCT GAAGATCAAC GTGCTCAACG ACAGCACGGC CAGCGTCGGC CACGACGAGA CGCTGACGGT GCAGAACGCC CGCACCCGCA CGGTGAAGGA CGGCGACGAG ACCGTCACCC TGGAAAAGGG CAACCGTAGC GTCACCCTGC AGACCGGCAG CGATACCCTG GACGTCAGGG ACAGCCGTAC GGTGAAGGTC GGCAGCGACC AGACCCACAG CACCGGCGGC GACTACAGCC ACACGGTGAC CGGCGACTAC AGCCTGACGG TGAACGGCAA TCTGACCATC AAGGTGAGCG GCACCCTGAC CCTGCAGAGC AGCGGCGACT TCACCGCCAG GAGCGACCTG TCGCTGACCC AGCAGGCCGG TACCTCGATC AGCCAGAAGG CCGGCACCTC CTTCGCCAAC CAGGCCGGTA CCTCGCTGGA CAACAAGGCC GGCACCACCC TGGTCAACGA CGCCGGCATC AGCCTGACCA ACAAGGCCGG CGCCGAGCAG ACGGTGGATG GCGGCGGCCT GCTGACCCTC AAGGGCGGCC TGGTCAAGAT CAACTGA
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Protein sequence | MPRPTDITTS LSLTTSALAN LFPEQLSGEE RLNGLGSLQL HSYSAAAPTL DSVVATHLTA TLHNDADLRP LDALIAEVRQ LPGDASADRY QVLLRPWLWW LTLASNNRVF QNKTTGEIVT GIFDGHGFGD YRLKLSGSYT PREYCVQYSE TDFAFVSRLL EEEGIFWFFT HEEGRHTLVL ADGNDAFPAI PNGPKVPYLS QEIGVRELHG VRSAQYCIQA VAGAYSATDY EFTTPTTSLY SRAEALAGSF SSYEHPGGYI AKARGDALTK QRVDGLRSQE KRLIGESDCR WLVPGHWFTL TGHDDANLNI DWVVTSVTHE ASHEHYRNRF EAIPKATNYR PPRATPKPRM HTQTARVVGK AGEEIWTDQY GRIKIQFPWD REGRNDETSS CWVRVVLPWS GKNFGMQFVP RIGQEVIVTF IDGDPDRPLV TGCVYNGDNA LPYALPANQT QSGIKTNSSK GGGGFNELRF EDKKDAEEVF LQAQKDLKIN VLNDSTASVG HDETLTVQNA RTRTVKDGDE TVTLEKGNRS VTLQTGSDTL DVRDSRTVKV GSDQTHSTGG DYSHTVTGDY SLTVNGNLTI KVSGTLTLQS SGDFTARSDL SLTQQAGTSI SQKAGTSFAN QAGTSLDNKA GTTLVNDAGI SLTNKAGAEQ TVDGGGLLTL KGGLVKIN
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