Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avin_50750 |
Symbol | |
ID | 7763923 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Azotobacter vinelandii DJ |
Kingdom | Bacteria |
Replicon accession | NC_012560 |
Strand | - |
Start bp | 5141501 |
End bp | 5142592 |
Gene Length | 1092 bp |
Protein Length | 363 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 643807903 |
Product | ImpA-related protein |
Protein accession | YP_002802137 |
Protein GI | 226947064 |
COG category | [S] Function unknown |
COG ID | [COG3515] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR03363] type VI secretion-associated protein, ImpA family |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.261884 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAGTTCTT CGCTTTCCCT GCCCTTGCCG CCGGACAGCC TGCTCGAACC GCTCTCGGCG GACTCGCCCT GCGGTCCGAG CCTGCGCTAC GACCCGGATT TCGACCGCCT GCGCGAGGCT CGCCGGGAGG AGGATGCGAG CCTGCCGAGC GGCGTCTGGC AGGCACGGAT CAAACTCGGC GACTGGGCGA CGGTAGAGAG GCTGGCCGGC GAACTGCTGC GCACCCGCAG CAAGGACCTG ATGGTGGCCG CCTGGCTGGG CGAGGCCTGG CTGCTGCGCA GGAACTGGGA AGGGCTGCCC CAGGCGCTGG CGCTGGTGAG CGGTCTGTGC GAACGCTATC CGGACGAGCT GCACCCGCAG GCCGAGGAGG GCGACCGCTC CTGGCGGGCG ACGCCGCTCG ACTGGCTGAT CCGCCGCTAC GCCGAGCTGT CGCTGGTCCG CCTGCCGCTG TTCGAGCCGG ACGACGAGTC CGCCCCCTTC GCCCTGCACG ACTGGCGGCA ACTGCAGTTG CAGCAGGTCG CCGCCGACGA CGGCAAGGCG GCCAAGGCCG CAGTCGAGGC GGCCCGGCAG AAACAGCGCA AGCTGGACGA GCGGATCAGG AGCACGCCGC TGCCGGTCTG GCTGCGCCGC CGCGCCTGTC TCGAACAGAG CGCGTGCACG CTGGAGCGTC TGGAGCGCTG GAGCGACGAG TACCTGGGCG AACTCGCTCC CGGTTTCGCT CCTTTGCGCG AGACCATCCG CCAACTGATC GCCCTGATGC AGGAGTTCAT CGCCATGCAC CCACGAGCAT CCGAGGCCGC CGCCGCTCCA TCCCCGGCCG GGGAGGCCGA ATCGGCCAGC GCCGCGCCGA CCGTCGCCAT GCCGGGCGTC GCCACGCCCT CCGGCCCGCC AGGCAGCCGC GAGCAGGCCT ACCGTCAATT GGGCCTGATC GCCGATTATC TGGCACGTAC CGAGCCGCAC AGTCCGGTTC CTTACCTGAT CCGCAAGGCG ATGGAGTGGG GCGACAAGCC CCTCGGCGAT CTGTTGTCCG AACTGCTGTC GGCGGACCCG GAGGCCCGGC GCGTCTGGAC CCTGCTGGGT ATCCTGAAGT GA
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Protein sequence | MSSSLSLPLP PDSLLEPLSA DSPCGPSLRY DPDFDRLREA RREEDASLPS GVWQARIKLG DWATVERLAG ELLRTRSKDL MVAAWLGEAW LLRRNWEGLP QALALVSGLC ERYPDELHPQ AEEGDRSWRA TPLDWLIRRY AELSLVRLPL FEPDDESAPF ALHDWRQLQL QQVAADDGKA AKAAVEAARQ KQRKLDERIR STPLPVWLRR RACLEQSACT LERLERWSDE YLGELAPGFA PLRETIRQLI ALMQEFIAMH PRASEAAAAP SPAGEAESAS AAPTVAMPGV ATPSGPPGSR EQAYRQLGLI ADYLARTEPH SPVPYLIRKA MEWGDKPLGD LLSELLSADP EARRVWTLLG ILK
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