Gene Avin_50070 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_50070 
SymboliolT 
ID7763858 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp5072765 
End bp5074222 
Gene Length1458 bp 
Protein Length485 aa 
Translation table11 
GC content65% 
IMG OID643807838 
Productmyo-inositol transporter 
Protein accessionYP_002802072 
Protein GI226946999 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00879] MFS transporter, sugar porter (SP) family 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGACA AGACAGTTGC ACCCCAGCAG CACGATATTT CCTACGTGCT GCGGATCTGC 
GCCGTGGCCG CCCTCGGCGG CCTTCTCTTC GGTTACGACA CCGCAGTGAT CTCCGGCGCC
GTGGAAGCCC TCCAGCAATA TTTTTCCCTC TCCCCCGCCG AAACCGGCTG GGCCGTCTCC
AACGTGGTGG TCGGCTGCAT CGTCGGCGCC CTGGGCGCCG GCTGGGTCGC CGGCCGCCTG
GGACGCAAGA AGGCCCTGGT ACTGTCGGCG ATCCTCTTCA CCGTCTCCGC CATCGGCGCC
GCGGTGGTGG ACAGCTTCGT CTGGTTCGTG ATCTACCGGA TCGTCGGCGG TCTGGCCGTG
GGCATCGCCT CGACGGTGTC GCCGATGTAC ATGTCCGAGG TGTCGCCGAA GGACATCCGC
GGACGCGCGC TGGGCATGCA GTCCTTCGCC ATCGTCGGCG GCCAGGTGGT GGTGTTCTAC
GTGAACTACC TGATCGCCAA GGGCGCCGCC GACACCTGGC TGGTCGAGTA CGGCTGGCGC
TGGATGCTCG GTTCCGAAGT GGTTCCCTGC ATCCTGTTCT GCCTGTTCGT CTTCTCCATC
CCGGAATCGC CGCGCTGGCA GGCCATGGTC GGCCAGGACG AACGGGCGCT GCGCACCCTG
AGGCGCATCT CCAACGACGC GCATGCCCAT CACCTGCTCA ATGAGATCAA GCACTCCCTG
CACCAGGACA GCCAGGGCCG GACACAGAAG CCGAACCTGC GCGAGGCGGG GCTGGCACTG
ATCCTCTTCG TCGGCTGCAT GCTGGCCATG CTGCAGCAGG TCACCGGGGT CAACGTGATG
ATGTATTACG CCCCCATGGT GTTGAAGGGC GTCACCGGCA GCACCGAGTC GGCGCTGTTC
CAGACCATCT GGATCGGGGT CATGCAGTTG GTCGGCACCA TCATCGGCAC CTGGCTGATC
GACCGCGTCG GTCGCCTGCC GCTGATGCGC GTCGGCACCG TCGGCATCGT CGCCAGCCTG
CTGCTCACCT CCTACGCTCT CTACGCCCAG GAGTCCGGCT ACCTGGCGCT GATCGGCATG
CTGCTGTTCA TGGTGCTCTT CGCGATCTCC TGGGGCGTCG GCACCTGGGT GCTGATCTCC
GAGATCTTCC CCAACCACAT GCGCTCCATG GGCATGAGCA TGGCGGTGTG CAGCATGTGG
ATCGCCAACT TCCTGGTGAC CCAGAGCTTC CCGATGCTCA ACGAGCACCC GGTACTGATC
GAGCGGTTCC ACGGCGCCTT CCCGATGTGG GTGTTCGCCG GCTGCTGCGT CTTCTGCTAC
TGGTTCGTCG CCCGTTTCGT CCCGGAAACC CGCGGCGTGT CCCTGGAACG CATGGAGGAA
GTGATGCTGG CCAAGCTCAA GCGGCAACCC CTGGCCGACG AAGAAGAAAG CGCCGCGCTG
CGCTCCAGCC GGGCCTGA
 
Protein sequence
MNDKTVAPQQ HDISYVLRIC AVAALGGLLF GYDTAVISGA VEALQQYFSL SPAETGWAVS 
NVVVGCIVGA LGAGWVAGRL GRKKALVLSA ILFTVSAIGA AVVDSFVWFV IYRIVGGLAV
GIASTVSPMY MSEVSPKDIR GRALGMQSFA IVGGQVVVFY VNYLIAKGAA DTWLVEYGWR
WMLGSEVVPC ILFCLFVFSI PESPRWQAMV GQDERALRTL RRISNDAHAH HLLNEIKHSL
HQDSQGRTQK PNLREAGLAL ILFVGCMLAM LQQVTGVNVM MYYAPMVLKG VTGSTESALF
QTIWIGVMQL VGTIIGTWLI DRVGRLPLMR VGTVGIVASL LLTSYALYAQ ESGYLALIGM
LLFMVLFAIS WGVGTWVLIS EIFPNHMRSM GMSMAVCSMW IANFLVTQSF PMLNEHPVLI
ERFHGAFPMW VFAGCCVFCY WFVARFVPET RGVSLERMEE VMLAKLKRQP LADEEESAAL
RSSRA