| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_49490 |
|---|
| Symbol | |
|---|
| ID | 7763803 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Azotobacter vinelandii DJ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012560 |
|---|
| Strand | + |
|---|
| Start bp | 5011929 |
|---|
| End bp | 5012906 |
|---|
| Gene Length | 978 bp |
|---|
| Protein Length | 325 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 643807784 |
|---|
| Product | Uncharacterized protein family UPF0065 |
|---|
| Protein accession | YP_002802019 |
|---|
| Protein GI | 226946946 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.00178438 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGCCCAT CGATCCGTCG CGCCCTGCTG GCGGCCGCCG CGCTGCTGCT GTGCAGCGCC
CGGGCCGCCG AACCGCACGC CGCGGAATGC ATAGTCCCGG CGGCCAGCGG CGGCGGCTTC
GACCTGGTCT GCAAGCTGGC GCGCGAGGCG CTGCAGGAGG CCGGCCTGAC CCGCCGGCCG
CTGCGCCTCG CCTACATGCC GGGCGGGGTC GGCGCGGTGG CCTACAACAC CATCGCCGCG
CAGCGGCCGG CCGAGCCCGA CACCCTGGTC ACCTTCTCCA GCGGTTCGCT GCTGAACATC
GCCCTGGGCA AGTTCGGCCG CTTCGACGAG AGCGCGGTGC GCTGGCTGGC GGTGATCGGC
ACCAGCTACG GCGCCCTGGC GGTACGCGCC GACTCGCCCT ACAAGACCCT GGACGATCTG
CTCGCGGCGC TCAGGAAGGA CCCCGACTCG GTGGTGATCG GCGCCTCCGG TACCGTCGGC
AGCCAGGACT GGATGCAACT CGCCCTGCTC GCCCGGCTGG CCGGCATCGA TCCGCGCGAG
CTGCACCACG TCGCCCTGGA GGGCGGCGGG GAAATCTCCA CGGCGCTGGT CGCCGGCCAC
GTGCAGGTGG GCAGTACCGA CATCTCCGAC TCCATGCCGC ACCTGAACGG CGGCGCCATC
CGCCTGCTGG TGGTGTTCGC CGAACGGCGC CTGGACGAGC CGGGGATGGC CGCCATCCCG
ACCGCCCGCG AGCTGGGCTA CGACGTGGTC TGGCCGGTGC TGCGCGGTCT CTACATGGGG
CCCGGGGTGA GCGACGCCGA CTACCGGCGC TGGAAGGACG CCTTCGACCG CCTGCTCGCC
TCCGAGGACT TCGCCCGCCT GCGCGACCGC TACGAGTTGT TCCCCTATGC CCTGACCGGC
GAAGCCCTGG AGGCGCATGT CAGGCAGCAG GTCGCCCGCT ATCGGGAAAT GGCCCGGGAC
TTCGGCCTGA TCCGCTGA
|
|---|
| Protein sequence | MGPSIRRALL AAAALLLCSA RAAEPHAAEC IVPAASGGGF DLVCKLAREA LQEAGLTRRP
LRLAYMPGGV GAVAYNTIAA QRPAEPDTLV TFSSGSLLNI ALGKFGRFDE SAVRWLAVIG
TSYGALAVRA DSPYKTLDDL LAALRKDPDS VVIGASGTVG SQDWMQLALL ARLAGIDPRE
LHHVALEGGG EISTALVAGH VQVGSTDISD SMPHLNGGAI RLLVVFAERR LDEPGMAAIP
TARELGYDVV WPVLRGLYMG PGVSDADYRR WKDAFDRLLA SEDFARLRDR YELFPYALTG
EALEAHVRQQ VARYREMARD FGLIR
|
|---|
| |